RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 PRMT9Q6P2P2 845 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 TTC23LQ6PF05 361 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 ZNF773Q6PK81 442 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 AKAP14Q86UN6 197 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 MMAAQ8IVH4 418 aaKnown RBP4.12□□□□□ -1.75
CHD1-204ENST00000505982 CMTM1Q8IZ96 169 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 JOSD2Q8TAC2 188 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 MCOLN3Q8TDD5 553 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 CAPSLQ8WWF8 208 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 MYDGFQ969H8 173 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 ECHDC3Q96DC8 303 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 CEP170P1Q96L14 293 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 QKIQ96PU8 341 aaKnown RBP eCLIP4.12□□□□□ -1.75
CHD1-204ENST00000505982 OR52B2Q96RD2 323 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 P2RX4Q99571 388 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 DOK1Q99704 481 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 MROQ9BYG7 248 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 WDR55Q9H6Y2 383 aaPredicted RBP4.12□□□□□ -1.75
CHD1-204ENST00000505982 CRLF2Q9HC73 371 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 DAZ3Q9NR90 486 aaKnown RBP4.12□□□□□ -1.75
CHD1-204ENST00000505982 SLC25A37Q9NYZ2 338 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 PDP1Q9P0J1 537 aaPredicted RBP4.12□□□□□ -1.75
CHD1-204ENST00000505982 TMEM216Q9P0N5 145 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 TRAPPC4Q9Y296 219 aa4.12□□□□□ -1.75
CHD1-204ENST00000505982 ZSWIM8A7E2V4 1837 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 ZNF646O15015 1829 aaPredicted RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 PTPRFP10586 1907 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 MIA3Q5JRA6 1907 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 ZNF638Q14966 1978 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 ATRXP46100 2492 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 TDRD6O60522 2096 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 TCRBV3S1A0A5B6 114 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 DHRS12A0PJE2 317 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 TMEM150BA6NC51 233 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 BBIP1A8MTZ0 92 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 KLLNB2CW77 178 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 H0YC42 278 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 M0QX08 132 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 CASC3O15234 703 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 MRPS12O15235 138 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 TRAF3IP2O43734 574 aaPredicted RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 TNNC2P02585 160 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 MLNP12872 115 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 ZNF250P15622 560 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 BCKDHBP21953 392 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 STOMP27105 288 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 NUDT1P36639 197 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 MAGEA3P43357 314 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 ACOT2P49753 483 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 MYL6P60660 151 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 RPS21P63220 83 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 BNIP2Q12982 314 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 PMS2P3Q13401 168 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 SF3A2Q15428 464 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 PTPN20Q4JDL3 420 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 VAX1Q5SQQ9 334 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 FAM45BPQ6NSW5 357 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 NANOGP8Q6NSW7 305 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 CBR4Q8N4T8 237 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 OR10R2Q8NGX6 335 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 FAM45AQ8TCE6 357 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 IL22RA2Q969J5 263 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 CERS2Q96G23 380 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 DUS3LQ96G46 650 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 RNF157Q96PX1 679 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 OR2M2Q96R28 347 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 RBBP8Q99708 897 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 COA1Q9GZY4 146 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 ING2Q9H160 280 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 LHX5Q9H2C1 402 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 NXF3Q9H4D5 531 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 DHX35Q9H5Z1 703 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 FANCEQ9HB96 536 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 CISHQ9NSE2 258 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 TBC1D24Q9ULP9 559 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 RBMX2Q9Y388 322 aaKnown RBP4.11□□□□□ -1.75
CHD1-204ENST00000505982 PTPRJQ12913 1337 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 PARP14Q460N5 1801 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 ZNF236Q9UL36 1845 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 MYLKQ15746 1914 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 SHROOM3Q8TF72 1996 aa4.11□□□□□ -1.75
CHD1-204ENST00000505982 GTF3C1Q12789 2109 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 COL11A1P12107 1806 aaPredicted RBP4.1□□□□□ -1.75
CHD1-204ENST00000505982 RALGAPA2Q2PPJ7 1873 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 UBR3Q6ZT12 1888 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 ANKRD31Q8N7Z5 1873 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 HIDE1A8MVS5 230 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 EVPLLA8MZ36 301 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 HACD1B0YJ81 288 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 TMX2-CTNND1H3BSU7 103 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 PSMD11O00231 422 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 CHST1O43916 411 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 TPST1O60507 370 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 AIFM1O95831 613 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 ASS1P00966 412 aaKnown RBP4.1□□□□□ -1.75
CHD1-204ENST00000505982 TDGF1P13385 188 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 FOLR1P15328 257 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 CRISP2P16562 243 aa4.1□□□□□ -1.75
CHD1-204ENST00000505982 ELK1P19419 428 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms