RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MPPED2Q15777 294 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 SMIM21Q3B7S5 101 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 GATD1Q8NB37 220 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 SLC25A39Q9BZJ4 359 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 FBXO6Q9NRD1 293 aaPredicted RBP4.27□□□□□ -1.73
NIPBL-204ENST00000504430 CIDEBQ9UHD4 219 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 PSG8Q9UQ74 426 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 CAMSAP1Q5T5Y3 1602 aa4.27□□□□□ -1.73
NIPBL-204ENST00000504430 M0QYV0 167 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 M0R1B8 84 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 PDE6DO43924 150 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 GLRXP35754 106 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 MEOX2P50222 304 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 GAGE1Q13065 139 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 GNMTQ14749 295 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 LY6G5CQ5SRR4 150 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 LPCAT3Q6P1A2 487 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 RAB43Q86YS6 212 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 GPR26Q8NDV2 337 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 OR4M1Q8NGD0 313 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 OR51G1Q8NGK1 321 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 PCNPQ8WW12 178 aaKnown RBP4.26□□□□□ -1.73
NIPBL-204ENST00000504430 C2orf88Q9BSF0 95 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 RNASE7Q9H1E1 156 aaKnown RBP4.26□□□□□ -1.73
NIPBL-204ENST00000504430 C14orf105Q9NVL8 296 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 ASTN1O14525 1302 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 OR4C46A6NHA9 309 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 LOC110117498-PIK3R3F6TDL0 507 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 K7EQS6 105 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 MT-CO2P00403 227 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 C4BPBP20851 252 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 PPOXP50336 477 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 NUTF2P61970 127 aaKnown RBP4.26□□□□□ -1.73
NIPBL-204ENST00000504430 FAM219BQ5XKK7 198 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 CNIH2Q6PI25 160 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 SCIMPQ6UWF3 145 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 TFAP2EQ6VUC0 442 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 C1QL2Q7Z5L3 287 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 ZCCHC24Q8N2G6 241 aaKnown RBP4.26□□□□□ -1.73
NIPBL-204ENST00000504430 OR5J2Q8NH18 312 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 QKIQ96PU8 341 aaKnown RBP eCLIP4.26□□□□□ -1.739e-7■■■□□ 18.8
NIPBL-204ENST00000504430 MCHR1Q99705 422 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 MED29Q9NX70 200 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 OPTCQ9UBM4 332 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 OR52A1Q9UKL2 312 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 CACNA1SQ13698 1873 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 IGKV1D-13A0A0B4J2D9 117 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 SULT2B1O00204 365 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 PLIN3O60664 434 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 NPIPB7O75200 414 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 TSPAN15O95858 294 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 IGKV1-13P0DP09 117 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 TNFRSF1BP20333 461 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 CACNG7P62955 275 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 BTN3A2P78410 334 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 LIN52Q52LA3 116 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 TPTE2P1Q5T6R2 138 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 REG3GQ6UW15 175 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 OR4F15Q8NGB8 312 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 DOK4Q8TEW6 326 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 RTBDNQ9BSG5 229 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-204ENST00000504430 DCSTAMPQ9H295 470 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 ING1Q9UK53 422 aaPredicted RBP4.26□□□□□ -1.73
NIPBL-204ENST00000504430 TRAPPC4Q9Y296 219 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 OR51B4Q9Y5P0 310 aa4.26□□□□□ -1.73
NIPBL-204ENST00000504430 DENND4AQ7Z401 1863 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 LOC100131303A0A0U1RQF7 123 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 TNFRSF11BO00300 401 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 MANBAO00462 879 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 TAAR5O14804 337 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 DLEU1O43261 78 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 PMS2P2O95744 297 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 IGF2P01344 180 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 SLC2A2P11168 524 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-204ENST00000504430 GPM6AP51674 278 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 RAB38P57729 211 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 PPP1CBP62140 327 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 TFDP2Q14188 446 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 POU6F1Q14863 301 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 OTUD1Q5VV17 481 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-204ENST00000504430 TMEM205Q6UW68 189 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 WDR82Q6UXN9 313 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 SLC22A15Q8IZD6 547 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 RBMXL3Q8N7X1 1067 aaKnown RBP4.25□□□□□ -1.73
NIPBL-204ENST00000504430 OR1L8Q8NGR8 309 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 EEF1AKMT1Q8WVE0 214 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 RXFP2Q8WXD0 754 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 LRRC58Q96CX6 371 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 APOL4Q9BPW4 351 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 AIF1LQ9BQI0 150 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 IDI2-AS1Q9NZ38 188 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 LRRK1Q38SD2 2015 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 TRBV5-4A0A0C4DH59 114 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 KPNA4O00629 521 aaPredicted RBP4.25□□□□□ -1.73
NIPBL-204ENST00000504430 EIF4EP06730 217 aaKnown RBP4.25□□□□□ -1.73
NIPBL-204ENST00000504430 TFPI2P48307 235 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 TEAD2Q15562 447 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 MICAQ29983 383 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 ZNF585BQ52M93 769 aa4.25□□□□□ -1.73
NIPBL-204ENST00000504430 MTURNQ8N3F0 131 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms