RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 SLC18B1Q6NT16 456 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 LYG1Q8N1E2 194 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 PNKDQ8N490 385 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 KLHDC1Q8N7A1 406 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 DTX3Q8N9I9 347 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 OR2T6Q8NHC8 308 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 LRRC29Q8WV35 223 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 SPTSSAQ969W0 71 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 PPP1R14AQ96A00 147 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 DGCR14Q96DF8 476 aaKnown RBP7.43□□□□□ -1.22
DHFR-202ENST00000504396 ZNF799Q96GE5 643 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 CLPTM1LQ96KA5 538 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 ERMAPQ96PL5 475 aaPredicted RBP7.43□□□□□ -1.22
DHFR-202ENST00000504396 CCL13Q99616 98 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 OPA3Q9H6K4 179 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 S100A14Q9HCY8 104 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 RPRD1BQ9NQG5 326 aaKnown RBP7.43□□□□□ -1.22
DHFR-202ENST00000504396 C14orf119Q9NWQ9 140 aa7.43□□□□□ -1.22
DHFR-202ENST00000504396 MRPL15Q9P015 296 aaKnown RBP7.43□□□□□ -1.22
DHFR-202ENST00000504396 IGLV1-36A0A0B4J1U3 117 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 A0A1B0GW55 424 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 TMEM82A0PJX8 343 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 B2RBV5 119 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 H3BUX3 64 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DCTN6O00399 190 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 BHLHE40O14503 412 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DENRO43583 198 aaKnown RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 NDUFB3O43676 98 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 XPNPEP2O43895 674 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 PSPNO60542 156 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DUX4L2P0CJ85 424 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DUX4L3P0CJ86 424 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DUX4L4P0CJ87 422 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DUX4L5P0CJ88 424 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DUX4L6P0CJ89 424 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DUX4L7P0CJ90 424 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 SMIM18P0DKX4 95 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 MUC1P15941 1255 aaPredicted RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 GRK5P34947 590 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 SAA4P35542 130 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 RPL5P46777 297 aaKnown RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 ZNF92Q03936 586 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 PCK2Q16822 640 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 RSPO1Q2MKA7 263 aaPredicted RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 SNAI3Q3KNW1 292 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 KPRPQ5T749 579 aaPredicted RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 TEX36Q5VZQ5 186 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DUX4L9Q6RFH8 374 aaPredicted RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 SLC36A1Q7Z2H8 476 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 TSEN54Q7Z6J9 526 aaKnown RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 GCSAMQ8N6F7 178 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 FAM216BQ8N7L0 139 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 SLC26A10Q8NG04 563 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 OR4S1Q8NGB4 309 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 OR56B2PQ8NGI1 322 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 FANK1Q8TC84 345 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 SLC7A13Q8TCU3 470 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 NMNAT3Q96T66 252 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 NKX3-1Q99801 234 aaPredicted RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 MRPS26Q9BYN8 205 aaKnown RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 RBM38Q9H0Z9 239 aaKnown RBP7.42□□□□□ -1.22
DHFR-202ENST00000504396 FN3KQ9H479 309 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 NECAP2Q9NVZ3 263 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 GFOD1Q9NXC2 390 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 DUX4Q9UBX2 424 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 FBLN5Q9UBX5 448 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 BLOC1S6Q9UL45 172 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 B9D1Q9UPM9 204 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 ENPP4Q9Y6X5 453 aa7.42□□□□□ -1.22
DHFR-202ENST00000504396 PLXNB1O43157 2135 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 A0A1W2PQ09 198 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 UNC119BA6NIH7 251 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 NKX6-3A6NJ46 265 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 ANKRD30BLA7E2S9 258 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 RNASEK-C17orf49H0YIS7 233 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 ARPC3O15145 178 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 SLC22A2O15244 555 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 FCN3O75636 299 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 LHBP01229 141 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 H1F0P07305 194 aaKnown RBP7.41□□□□□ -1.22
DHFR-202ENST00000504396 ZNF823P16415 610 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 POU1F1P28069 291 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 DDOSTP39656 456 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 SLC7A2P52569 658 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 KLF10Q13118 480 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 TAF13Q15543 124 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 RFX4Q33E94 735 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 LRRC10Q5BKY1 277 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 WDR38Q5JTN6 314 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 GLYATL3Q5SZD4 288 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 SMARCD3Q6STE5 483 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 ZBTB46Q86UZ6 589 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 OR6V1Q8N148 313 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 LY6G5BQ8NDX9 201 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 OR51G2Q8NGK0 314 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 OR4C15Q8NGM1 316 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 OR4K13Q8NH42 304 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 SSX3Q99909 188 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 COPS4Q9BT78 406 aa7.41□□□□□ -1.22
DHFR-202ENST00000504396 FAM234AQ9H0X4 552 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms