RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 LINC01547P58512 204 aaPredicted RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HILS1P60008 231 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RPL31P62899 125 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ECH1Q13011 328 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TFDP2Q14188 446 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 PDK2Q15119 407 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RFX4Q33E94 735 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 GCSAMLQ5JQS6 135 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ACER2Q5QJU3 275 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CPTPQ5TA50 214 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RWDD4Q6NW29 188 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DUX4L9Q6RFH8 374 aaPredicted RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 LCLAT1Q6UWP7 414 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DRAM2Q6UX65 266 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RTL4Q6ZR62 310 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 H2AFVQ71UI9 128 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 KLHDC8BQ8IXV7 354 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HS3ST5Q8IZT8 346 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SVOPLQ8N434 492 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CCDC71LQ8N9Z2 235 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 WDR31Q8NA23 367 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ZNF680Q8NEM1 530 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 OR2L5Q8NG80 312 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 OR10G8Q8NGN5 311 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RFESDQ8TAC1 157 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ACTL9Q8TC94 416 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SPPL2AQ8TCT8 520 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MAPK15Q8TD08 544 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DOK4Q8TEW6 326 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ELSPBP1Q96BH3 223 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 WDR34Q96EX3 536 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RNF145Q96MT1 663 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 OR5B12Q96R08 314 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TBX15Q96SF7 602 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FOXC2Q99958 501 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HES7Q9BYE0 225 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HOXD1Q9GZZ0 328 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 WDR13Q9H1Z4 485 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DSN1Q9H410 356 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DHX35Q9H5Z1 703 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 EXOSC3Q9NQT5 275 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SPANXB1Q9NS25 103 aaPredicted RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 PARVAQ9NVD7 372 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 GIN1Q9NXP7 522 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 UVRAGQ9P2Y5 699 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DUX4Q9UBX2 424 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 BTNL2Q9UIR0 455 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ING4Q9UNL4 249 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TFR2Q9UP52 801 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SAMD4AQ9UPU9 718 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CCL26Q9Y258 94 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ASF1AQ9Y294 204 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MRPS18CQ9Y3D5 142 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CEP250Q9BV73 2442 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SDK1Q7Z5N4 2213 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DCHS1Q96JQ0 3298 aa3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HELZP42694 1942 aaKnown RBP3.44□□□□□ -1.86
PDLIM1P4-201ENST00000504327 GON4LQ3T8J9 2241 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TICRRQ7Z2Z1 1910 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TRAV19A0A0A6YYK7 116 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MIF4GDA9UHW6 222 aaKnown RBP3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FTCDNL1E5RQL4 147 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 G3V3Y1 287 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 H0Y980 276 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 H0YJX3 145 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 H3BNH8 94 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 M0QYV0 167 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 NTN3O00634 580 aaPredicted RBP3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HAT1O14929 419 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MGRN1O60291 552 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CDC40O60508 579 aaKnown RBP eCLIP3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HPGDSO60760 199 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ZG16O60844 167 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 VAMP5O95183 116 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SNAP29O95721 258 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RAB36O95755 333 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 GCGP01275 180 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HLA-AP01891 365 aaKnown RBP3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FABP1P07148 127 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CD55P08174 381 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SNRPCP09234 159 aaKnown RBP3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 WNT2P09544 360 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 OR4E1P0C645 316 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CT45A6P0DMU7 189 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CT45A5P0DMU8 189 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CT45A7P0DMV0 189 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CD1DP15813 335 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TBPP20226 339 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 GSSP48637 474 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 GPM6AP51674 278 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CRIP2P52943 208 aaPredicted RBP3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MFAP2P55001 183 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TAS2R39P59534 338 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ERVK-16P61578 105 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 SLC7A9P82251 487 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 HMGCS1Q01581 520 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 BCL2L1Q07817 233 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FCHO2Q0JRZ9 810 aa3.43□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ST3GAL4Q11206 333 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms