RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 GRPP07492 148 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 H2BFMP0C1H6 154 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 IRF2P14316 349 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 PRTN3P24158 256 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 FPR2P25090 351 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 DCTDP32321 178 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 NPY4RP50391 375 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 FGF12P61328 243 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 APOFQ13790 326 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 PTGES3Q15185 160 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 TIGD6Q17RP2 521 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 KDM4DQ6B0I6 523 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 NLRC3Q7RTR2 1065 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 BCDIN3DQ7Z5W3 292 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 DHRSXQ8N5I4 330 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 TFAP2CQ92754 450 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 OTULINQ96BN8 352 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 TBX15Q96SF7 602 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 TEAD3Q99594 435 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 ADI1Q9BV57 179 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 ANKRD60Q9BZ19 345 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 OR10A2Q9H208 303 aa11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 PAPOLBQ9NRJ5 636 aaKnown RBP11.59□□□□□ -0.55
PDLIM7-211ENST00000504318 TRAV38-1A0A0B4J264 116 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 MDFIC2A0A1B0GVS7 189 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 ZAR1LA6NP61 321 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 ANKRD30BLA7E2S9 258 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 M0R129 80 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 CST4P01036 141 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 GYPAP02724 150 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 SFTPBP07988 381 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 HKR1P10072 659 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 CFL1P23528 166 aaKnown RBP11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 CAPGP40121 348 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 ROM1Q03395 351 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 AWAT1Q58HT5 328 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 AADACL4Q5VUY2 407 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 C12orf73Q69YU5 71 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 BTNL3Q6UXE8 466 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 C12orf54Q6X4T0 127 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 CSNK2A3Q8NEV1 391 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 THEM6Q8WUY1 208 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 OR5P3Q8WZ94 311 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 DUX5Q96PT3 197 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 YIPF3Q9GZM5 350 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 SIRPDQ9H106 197 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 SP140LQ9H930 580 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF556Q9HAH1 456 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 BRD7Q9NPI1 651 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 BATF3Q9NR55 127 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 C14orf119Q9NWQ9 140 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 TVP23BQ9NYZ1 205 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 KIF17Q9P2E2 1029 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 SCOCQ9UIL1 159 aa11.58□□□□□ -0.56
PDLIM7-211ENST00000504318 IGHV3OR15-7A0A075B7D8 119 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 ADAM20O43506 726 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 NDUFA2O43678 99 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 ENSAO43768 121 aaKnown RBP11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 RNASE1P07998 156 aaKnown RBP11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 ESRRGP62508 458 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 ACTG1P63261 375 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 POU4F2Q12837 409 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 PRDX4Q13162 271 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 SLC9A3R2Q15599 337 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 ATPAF1Q5TC12 328 aaPredicted RBP11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 SLX4IPQ5VYV7 408 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 TTC23Q5W5X9 447 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 DEGS2Q6QHC5 323 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 BOLLQ8N9W6 283 aaKnown RBP11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 LY6G5BQ8NDX9 201 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 LRRC29Q8WV35 223 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 PGAM5Q96HS1 289 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 CNBD2Q96M20 576 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 NIPAL2Q9H841 368 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 ENOPH1Q9UHY7 261 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 CMYA5Q8N3K9 4069 aa11.57□□□□□ -0.56
PDLIM7-211ENST00000504318 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 A0A0U1RQV5 110 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 A6NLC8 198 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF879B4DU55 563 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 E9PQ18 207 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 PSMD9O00233 223 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 CDIPTO14735 213 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 TNFAIP8O95379 198 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 MUC1P15941 1255 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 MYF6P23409 242 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 TGM4P49221 684 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 MFGE8Q08431 387 aaPredicted RBP11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 MZT1Q08AG7 82 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 IL18R1Q13478 541 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 KCNJ8Q15842 424 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 SNAPC1Q16533 368 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 GFOD2Q3B7J2 385 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 C11orf91Q3C1V1 193 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 WDR38Q5JTN6 314 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 STUMQ69YW2 141 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 BRD3OSQ6XYD6 125 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 Q6ZSR3 168 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 ZNF555Q8NEP9 628 aa11.56□□□□□ -0.56
PDLIM7-211ENST00000504318 OR8S1Q8NH09 359 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms