RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 A0A0U1RQV5 110 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 TOX3O15405 576 aaPredicted RBP13.19□□□□□ -0.3
SNF8-203ENST00000504000 PIAS2O75928 621 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 FCGR3AP08637 254 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 FOLR2P14207 255 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 ADH6P28332 368 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 THBS4P35443 961 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 PTGFRP43088 359 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 SNU13P55769 128 aaKnown RBP13.19□□□□□ -0.3
SNF8-203ENST00000504000 S100A12P80511 92 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 COMMD2Q86X83 199 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 CBLN2Q8IUK8 224 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 KDF1Q8NAX2 398 aaPredicted RBP13.19□□□□□ -0.3
SNF8-203ENST00000504000 PP6455Q8WZ26 134 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 ROBO4Q8WZ75 1007 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 SPACA5Q96QH8 159 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 GPER1Q99527 375 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 DUSP15Q9H1R2 295 aaPredicted RBP13.19□□□□□ -0.3
SNF8-203ENST00000504000 BANF2Q9H503 90 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 TAF9BQ9HBM6 251 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 C2CD4DB7Z1M9 353 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 RNASEK-C17orf49H0YIS7 233 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 JTBO76095 146 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 IFNA2P01563 188 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 IFNA4P05014 189 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 PTGDSP41222 190 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 DHPSP49366 369 aaPredicted RBP13.19□□□□□ -0.3
SNF8-203ENST00000504000 CSNK2A1P68400 391 aaPredicted RBP13.19□□□□□ -0.3
SNF8-203ENST00000504000 MFAP5Q13361 173 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 KISS1Q15726 138 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 TMEM268Q5VZI3 342 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 CRIP3Q6Q6R5 217 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 BTNL8Q6UX41 500 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 C16orf47Q6ZP98 133 aaPredicted RBP13.19□□□□□ -0.3
SNF8-203ENST00000504000 CSNK2A3Q8NEV1 391 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 OR51T1Q8NGJ9 327 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 RELTQ969Z4 430 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 CNTNAP3Q9BZ76 1288 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 RNF122Q9H9V4 155 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 KLRF1Q9NZS2 232 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 TUBD1Q9UJT1 453 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 C14orf166Q9Y224 244 aaKnown RBP13.19□□□□□ -0.3
SNF8-203ENST00000504000 HDGFL3Q9Y3E1 203 aa13.19□□□□□ -0.3
SNF8-203ENST00000504000 IGHV3-20A0A0C4DH32 117 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 PMS2P1A4D2B8 440 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 RER1O15258 196 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 HKR1P10072 659 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 MUC1P15941 1255 aaPredicted RBP13.18□□□□□ -0.3
SNF8-203ENST00000504000 CPT2P23786 658 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 NPBWR1P48145 328 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 F2RL1P55085 397 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 HMGN3Q15651 99 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 AVPI1Q5T686 147 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 PHF3Q92576 2039 aaKnown RBP13.18□□□□□ -0.3
SNF8-203ENST00000504000 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
SNF8-203ENST00000504000 NUDT22Q9BRQ3 303 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 PECRQ9BY49 303 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 EHFQ9NZC4 300 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 EDARQ9UNE0 448 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 V9GYS6 101 aa13.18□□□□□ -0.3
SNF8-203ENST00000504000 A0A1W2PP11 408 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 TLX3O43711 291 aaPredicted RBP13.17□□□□□ -0.3
SNF8-203ENST00000504000 FBXO24O75426 580 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 CTSDP07339 412 aaPredicted RBP13.17□□□□□ -0.3
SNF8-203ENST00000504000 GLRA1P23415 457 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 EIF1P41567 113 aaKnown RBP13.17□□□□□ -0.3
SNF8-203ENST00000504000 ZNF133P52736 654 aaPredicted RBP13.17□□□□□ -0.3
SNF8-203ENST00000504000 FAM3AP98173 230 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 SMAD4Q13485 552 aaKnown RBP13.17□□□□□ -0.3
SNF8-203ENST00000504000 ZNF283Q8N7M2 679 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 BHLHE23Q8NDY6 225 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 SOX7Q9BT81 388 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 ADAT1Q9BUB4 502 aaKnown RBP13.17□□□□□ -0.3
SNF8-203ENST00000504000 ST6GALNAC5Q9BVH7 336 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 TPSD1Q9BZJ3 242 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 EGLN1Q9GZT9 426 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 COA4Q9NYJ1 87 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 FER1L5A0AVI2 2057 aa13.17□□□□□ -0.3
SNF8-203ENST00000504000 MEX3AA1L020 520 aaKnown RBP13.16□□□□□ -0.3
SNF8-203ENST00000504000 AQP7P3A6NL99 342 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 ZNF726A6NNF4 738 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 ONECUT2O95948 504 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 HEXBP07686 556 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 QDPRP09417 244 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 ZNF708P17019 499 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 ZNF43P17038 809 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 BLVRBP30043 206 aaPredicted RBP13.16□□□□□ -0.3
SNF8-203ENST00000504000 CDAP32320 146 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 RBMXP38159 391 aaKnown RBP13.16□□□□□ -0.3
SNF8-203ENST00000504000 DVL1P1P54792 670 aaPredicted RBP13.16□□□□□ -0.3
SNF8-203ENST00000504000 PDZK1IP1Q13113 114 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 RBM39Q14498 530 aaKnown RBP13.16□□□□□ -0.3
SNF8-203ENST00000504000 CHRFAM7AQ494W8 412 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 FOXL2NBQ6ZUU3 175 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 FAM57BQ71RH2 274 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 COMMD1Q8N668 190 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 OR51F2Q8NH61 342 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 HAS2Q92819 552 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 HRH4Q9H3N8 390 aa13.16□□□□□ -0.3
SNF8-203ENST00000504000 TRBV11-1A0A0K0K1C0 115 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms