RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SSC4DQ8WTU2 575 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 PIGCQ92535 297 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 RNASE6Q93091 150 aaKnown RBP7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 HAVCR1Q96D42 359 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 POM121Q96HA1 1249 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 SOSTQ9BQB4 213 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 SOX7Q9BT81 388 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 PAPOLGQ9BWT3 736 aaKnown RBP7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 CST11Q9H112 138 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 CNTD2Q9H8S5 307 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 DIABLOQ9NR28 239 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 RHBDL2Q9NX52 303 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 EXTL2Q9UBQ6 330 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 NDRG3Q9UGV2 375 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 ERRFI1Q9UJM3 462 aaPredicted RBP7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 RAB22AQ9UL26 194 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 RTTNQ86VV8 2226 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 CFAP47Q6ZTR5 3102 aa7.01□□□□□ -1.29
TOPBP1-202ENST00000503338 CHD8Q9HCK8 2581 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 IGKV1-9A0A0C4DH69 117 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 A6NIN4 97 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 OR5B21A6NL26 309 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 VSTM5A8MXK1 200 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 IQCF6A8MYZ5 107 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 M0R1B8 84 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 CTDSPLO15194 276 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 UPK1BO75841 260 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 AGFG2O95081 481 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 ELK1P19419 428 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 ANOS1P23352 680 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 PTGFRP43088 359 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 ZNF83P51522 516 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 MTCP1P56278 107 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 DEFA1P59665 94 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 DEFA3P59666 94 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 CEACAM21Q3KPI0 293 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 C2orf76Q3KRA6 126 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 C4orf17Q53FE4 359 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 PYDC2Q56P42 97 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 HACD4Q5VWC8 232 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 PLCXD3Q63HM9 321 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 MOB3CQ70IA8 216 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 FJX1Q86VR8 437 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 ANGPTL5Q86XS5 388 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 PAQR4Q8N4S7 273 aaPredicted RBP7□□□□□ -1.29
TOPBP1-202ENST00000503338 ZNF808Q8N4W9 903 aaPredicted RBP7□□□□□ -1.29
TOPBP1-202ENST00000503338 SPERTQ8NA61 448 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 ZSCAN4Q8NAM6 433 aaPredicted RBP7□□□□□ -1.29
TOPBP1-202ENST00000503338 KCNG3Q8TAE7 436 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 SYNPRQ8TBG9 265 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 CA5BP1Q8WTZ4 195 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 SLC25A28Q96A46 364 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 CMBLQ96DG6 245 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 ITPKCQ96DU7 683 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 NUDT16L1Q9BRJ7 211 aaKnown RBP7□□□□□ -1.29
TOPBP1-202ENST00000503338 URM1Q9BTM9 101 aaKnown RBP7□□□□□ -1.29
TOPBP1-202ENST00000503338 SRRQ9GZT4 340 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 PPP1R3EQ9H7J1 279 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 KCNJ16Q9NPI9 418 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 GPR173Q9NS66 373 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 CGGBP1Q9UFW8 167 aaPredicted RBP7□□□□□ -1.29
TOPBP1-202ENST00000503338 MRPS28Q9Y2Q9 187 aaKnown RBP7□□□□□ -1.29
TOPBP1-202ENST00000503338 V9GYH0 126 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 SHANK1Q9Y566 2161 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 FRYQ5TBA9 3013 aa7□□□□□ -1.29
TOPBP1-202ENST00000503338 RP1L1Q8IWN7 2480 aaPredicted RBP7□□□□□ -1.29
TOPBP1-202ENST00000503338 ACACBO00763 2458 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 TMEM272A0A1B0GTI8 110 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 PRSS44E7EML9 344 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 H3BUI4 141 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 J3QRK9 145 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 LDLRAD4O15165 306 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 XRCC3O43542 346 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 CYB5AP00167 134 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 EIF4EP06730 217 aaKnown RBP6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 CHRM2P08172 466 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 FAM157BP0CG42 384 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 KITLGP21583 273 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 CD40P25942 277 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 CCKARP32238 428 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 GLRXP35754 106 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 CLDN12P56749 244 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 PRDX4Q13162 271 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 ARL6IP1Q15041 203 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 P2RY14Q15391 338 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 TMEM69Q5SWH9 247 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 RGS7BPQ6MZT1 257 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 GLIPR1L1Q6UWM5 242 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 NCCRP1Q6ZVX7 275 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 MYPOPQ86VE0 399 aaPredicted RBP6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 ZNF573Q86YE8 665 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 SAXO1Q8IYX7 474 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 CMTM4Q8IZR5 234 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 MINDY2Q8NBR6 621 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 NUP37Q8NFH4 326 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 PXT1Q8NFP0 134 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 OR4M1Q8NGD0 313 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 OR4D6Q8NGJ1 314 aa6.99□□□□□ -1.29
TOPBP1-202ENST00000503338 OR5H6Q8NGV6 325 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms