RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 RNF212BA8MTL3 300 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 PLA2G10O15496 165 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 GSTZ1O43708 216 aaPredicted RBP17.11■□□□□ 0.33
ACTN4-208ENST00000497637 ALX3O95076 343 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 ALDOBP05062 364 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 ERCC1P07992 297 aaPredicted RBP17.11■□□□□ 0.33
ACTN4-208ENST00000497637 SPNP16150 400 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 THBS4P35443 961 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 POU3F4P49335 361 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 DAZAP2Q15038 168 aaPredicted RBP17.11■□□□□ 0.33
ACTN4-208ENST00000497637 TAB1Q15750 504 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 RPRMLQ8N4K4 120 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 OR51D1Q8NGF3 324 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 C15orf40Q8WUR7 153 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 BCL2L2Q92843 193 aaPredicted RBP17.11■□□□□ 0.33
ACTN4-208ENST00000497637 SGK3Q96BR1 496 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 C10orf35Q96D05 121 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 UQCC2Q9BRT2 126 aa17.11■□□□□ 0.33
ACTN4-208ENST00000497637 CGGBP1Q9UFW8 167 aaPredicted RBP17.11■□□□□ 0.33
ACTN4-208ENST00000497637 MTRF1O75570 445 aaKnown RBP17.1■□□□□ 0.33
ACTN4-208ENST00000497637 DHRS3O75911 302 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 ARR3P36575 388 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 MMP15P51511 669 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 SF3B4Q15427 424 aaKnown RBP eCLIP17.1■□□□□ 0.334e-7■■■■□ 24
ACTN4-208ENST00000497637 ACSF3Q4G176 576 aaPredicted RBP17.1■□□□□ 0.33
ACTN4-208ENST00000497637 GLYATL3Q5SZD4 288 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 C9orf135Q5VTT2 229 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 TMEM53Q6P2H8 277 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 ANKRD16Q6P6B7 361 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 KRTAP1-3Q8IUG1 177 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 OR5AS1Q8N127 324 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 OR1K1Q8NGR3 316 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 RFT1Q96AA3 541 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 LRRC46Q96FV0 321 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 SORCS2Q96PQ0 1159 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 THAP7Q9BT49 309 aaPredicted RBP17.1■□□□□ 0.33
ACTN4-208ENST00000497637 C12orf49Q9H741 205 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 ZNF391Q9UJN7 358 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 ZANQ9Y493 2812 aa17.1■□□□□ 0.33
ACTN4-208ENST00000497637 A0A096LPE4 126 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 A0A1W2PPZ6 126 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 DHRS7CA6NNS2 312 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 INAFM1C9JVW0 142 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 LDLRAD4O15165 306 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 LCATP04180 440 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 RFX2P48378 723 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 HGFACQ04756 655 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 SNAI3Q3KNW1 292 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 SFRP5Q5T4F7 317 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 OR2A2Q6IF42 318 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 CCBE1Q6UXH8 406 aaPredicted RBP17.09■□□□□ 0.33
ACTN4-208ENST00000497637 TFAP2EQ6VUC0 442 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 FAM214BQ7L5A3 538 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 JAGN1Q8N5M9 183 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 OR52N4Q8NGI2 321 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 OR5M9Q8NGP3 310 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 OR13C9Q8NGT0 318 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 TRIM63Q969Q1 353 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 SLC22A4Q9H015 551 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 C11orf54Q9H0W9 315 aaPredicted RBP17.09■□□□□ 0.33
ACTN4-208ENST00000497637 RGCCQ9H4X1 137 aa17.09■□□□□ 0.33
ACTN4-208ENST00000497637 METTL17Q9H7H0 456 aaPredicted RBP17.09■□□□□ 0.33
ACTN4-208ENST00000497637 TMEM272A0A1B0GTI8 110 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 FIGNL2A6NMB9 653 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 IL18BPO95998 194 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 PTH2RP49190 550 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 GFOD2Q3B7J2 385 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 NSUN5P2Q63ZY6 315 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 UTS2BQ765I0 119 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 C9orf106Q8NAJ2 232 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 CPEB3Q8NE35 698 aaKnown RBP17.08■□□□□ 0.32
ACTN4-208ENST00000497637 PTX4Q96A99 478 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 B3GNT2Q9NY97 397 aa17.08■□□□□ 0.32
ACTN4-208ENST00000497637 MRPS7Q9Y2R9 242 aaKnown RBP17.08■□□□□ 0.32
ACTN4-208ENST00000497637 LINC00854A0A1B0GVQ3 168 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 FUOMA2VDF0 154 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 EEF1E1O43324 174 aaKnown RBP17.07■□□□□ 0.32
ACTN4-208ENST00000497637 XRCC3O43542 346 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 GOSR1O95249 250 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 CNOT4O95628 575 aaKnown RBP17.07■□□□□ 0.32
ACTN4-208ENST00000497637 HLA-HP01893 362 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 CDK2P24941 298 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 INPP1P49441 399 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 BCAP31P51572 246 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 MRPS10P82664 201 aaKnown RBP17.07■□□□□ 0.32
ACTN4-208ENST00000497637 PLA2G7Q13093 441 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 MZT2BQ6NZ67 158 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 COLCA1Q6ZS62 124 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 NRARPQ7Z6K4 114 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 IZUMO1Q8IYV9 350 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 PP6455Q8WZ26 134 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 YIPF5Q969M3 257 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 REEP6Q96HR9 211 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 ZFP3Q96NJ6 502 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 C1QTNF5Q9BXJ0 243 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 CNTD2Q9H8S5 307 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 PLEKHA1Q9HB21 404 aa17.07■□□□□ 0.32
ACTN4-208ENST00000497637 H7C1Q1 480 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 LANCL1O43813 399 aa17.06■□□□□ 0.32
ACTN4-208ENST00000497637 CD79AP11912 226 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms