RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ATPAF2Q8N5M1 289 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 ZFP41Q8N8Y5 198 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 CCDC71LQ8N9Z2 235 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 OR52E2Q8NGJ4 325 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 OR5L1Q8NGL2 311 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 TMEM230Q96A57 120 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 NXF2Q9GZY0 626 aaKnown RBP4.77□□□□□ -1.65
BRCA1-224ENST00000497488 ST3GAL6Q9Y274 331 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 MTCH2Q9Y6C9 303 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 SSC5DA1L4H1 1573 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 PCNTO95613 3336 aa4.77□□□□□ -1.65
BRCA1-224ENST00000497488 IGHV3OR16-13A0A075B7E8 117 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 FAM172BPA6NC97 362 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 PMS2P5A8MQ11 134 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 M0QZ92 97 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 RPS17P08708 135 aaKnown RBP4.76□□□□□ -1.65
BRCA1-224ENST00000497488 ZSCAN5DPP0CG00 497 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 PGA4P0DJD7 388 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 PGA3P0DJD8 388 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 PGA5P0DJD9 388 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 GGT1P19440 569 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 CHRNB4P30926 498 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 GALR1P47211 349 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 STC1P52823 247 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 RHOAP61586 193 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 NUTF2P61970 127 aaKnown RBP4.76□□□□□ -1.65
BRCA1-224ENST00000497488 POLR2GP62487 172 aaKnown RBP eCLIP4.76□□□□□ -1.65
BRCA1-224ENST00000497488 CD164Q04900 197 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 CKAP4Q07065 602 aaKnown RBP4.76□□□□□ -1.65
BRCA1-224ENST00000497488 PPIDQ08752 370 aaKnown RBP4.76□□□□□ -1.65
BRCA1-224ENST00000497488 ZNF763Q0D2J5 394 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 TRAM1Q15629 374 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 IZUMO4Q1ZYL8 232 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 TMEM179Q6ZVK1 233 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 CATSPER3Q86XQ3 398 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 ZADH2Q8N4Q0 377 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 OR4F15Q8NGB8 312 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 OR2AE1Q8NHA4 323 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 NTN5Q8WTR8 489 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-224ENST00000497488 TMEM190Q8WZ59 177 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 PTH2Q96A98 100 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 DCPSQ96C86 337 aaKnown RBP4.76□□□□□ -1.65
BRCA1-224ENST00000497488 FBXO8Q9NRD0 319 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 TREM2Q9NZC2 230 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 IL17CQ9P0M4 197 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 RAB23Q9ULC3 237 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 USH1CQ9Y6N9 552 aa4.76□□□□□ -1.65
BRCA1-224ENST00000497488 THSD7BQ9C0I4 1608 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 IGHV1OR15-1A0A075B7D0 117 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 A0A0B4J2A0 478 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 A0A1W2PQL4 384 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-224ENST00000497488 K7N7A8 449 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 M0R036 132 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 M0R1B8 84 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 ACOT8O14734 319 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 CRXO43186 299 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-224ENST00000497488 IDH3BO43837 385 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 RAB3DO95716 219 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 NQO1P15559 274 aaKnown RBP4.75□□□□□ -1.65
BRCA1-224ENST00000497488 AQP1P29972 269 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 HRH1P35367 487 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 FKBP1AP62942 108 aaKnown RBP4.75□□□□□ -1.65
BRCA1-224ENST00000497488 ATP6AP1Q15904 470 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 POU2AF1Q16633 256 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 PDZD11Q5EBL8 140 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 C9orf66Q5T8R8 295 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 BSPRYQ5W0U4 402 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 HBMQ6B0K9 141 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 THOC7Q6I9Y2 204 aaKnown RBP4.75□□□□□ -1.65
BRCA1-224ENST00000497488 MED27Q6P2C8 311 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 SPSB3Q6PJ21 355 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 CXCL17Q6UXB2 119 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 PEX26Q7Z412 305 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 MRPL55Q7Z7F7 128 aaKnown RBP4.75□□□□□ -1.65
BRCA1-224ENST00000497488 SMIM29Q86T20 159 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 CDC20BQ86Y33 519 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 FAM71AQ8IYT1 594 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 OR8G5Q8NG78 346 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 OR10W1Q8NGF6 305 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 OR51G1Q8NGK1 321 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 OR6Q1Q8NGQ2 317 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 SYNPRQ8TBG9 265 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 SDR42E1Q8WUS8 393 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 RNF138Q8WVD3 245 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 FGGYQ96C11 551 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 P2RX4Q99571 388 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 SH3GL3Q99963 347 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 APOL4Q9BPW4 351 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 C20orf144Q9BQM9 153 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 ZBP1Q9H171 429 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 PRORYQ9H606 182 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 RPF2Q9H7B2 306 aaKnown RBP4.75□□□□□ -1.65
BRCA1-224ENST00000497488 FKBP14Q9NWM8 211 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 XCL2Q9UBD3 114 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 SHPKQ9UHJ6 478 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 SLC22A13Q9Y226 551 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 VSIG4Q9Y279 399 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 AP3M1Q9Y2T2 418 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 WIF1Q9Y5W5 379 aa4.75□□□□□ -1.65
BRCA1-224ENST00000497488 IGHV2OR16-5A0A0B4J2B6 119 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms