RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 NALCNQ8IZF0 1738 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 IGHV2OR16-5A0A0B4J2B6 119 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM129A0AVI4 362 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC22A20A6NK97 555 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CLDN24A6NM45 220 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 C15orf65H3BRN8 121 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 TNFSF11O14788 317 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CASKO14936 926 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 DEGS1O15121 323 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ERI3O43414 337 aaKnown RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF217O75362 1048 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CLIC3O95833 236 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 HLA-AP01891 365 aaKnown RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ALOX5APP20292 161 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ADORA2AP29274 412 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 EPHA3P29320 983 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CMPK1P30085 196 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 FGF9P31371 208 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CDKN2BP42772 138 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 XCR1P46094 333 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 RPL21P46778 160 aaKnown RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ATP1B3P54709 279 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 MTCP1P56278 107 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 TAS2R50P59544 299 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 LILRA4P59901 499 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 EIF2B1Q14232 305 aaKnown RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZIC1Q15915 447 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF77Q15935 545 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 IQCJQ1A5X6 159 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 XAF1Q6GPH4 301 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 C22orf42Q6IC83 251 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 DNAJC24Q6P3W2 148 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CEACAM20Q6UY09 585 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 TMUB2Q71RG4 321 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 GOLGA7Q7Z5G4 137 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 P2RY8Q86VZ1 359 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST3H2BBQ8N257 126 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 SPICQ8N5J4 248 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF676Q8N7Q3 588 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CHST4Q8NCG5 386 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OR10G4Q8NGN3 311 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OR13C6PQ8NH95 151 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 C16orf52Q8NHV5 167 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 GPR119Q8TDV5 335 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM151AQ8WW52 585 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 PYCR2Q96C36 320 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 GPR146Q96CH1 333 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 C10orf35Q96D05 121 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 LGALS12Q96DT0 336 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 SCRN2Q96FV2 425 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 HPDLQ96IR7 371 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 BTF3L4Q96K17 158 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 COPS8Q99627 209 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 MRPL57Q9BQC6 102 aaKnown RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 MIEN1Q9BRT3 115 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ABHD14AQ9BUJ0 271 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OR8D2Q9GZM6 311 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZBP1Q9H171 429 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ASF1BQ9NVP2 202 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ASB6Q9NWX5 421 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 MRPL16Q9NX20 251 aaKnown RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF629Q9UEG4 869 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 NAT8Q9UHE5 227 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF107Q9UII5 783 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ERG28Q9UKR5 140 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 TRAPPC2LQ9UL33 140 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 SIGLEC9Q9Y336 463 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ATP10BO94823 1461 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 PTPRJQ12913 1337 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 IGSF9BQ9UPX0 1349 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ABCA9Q8IUA7 1624 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A087WWV3 80 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 A0A0G2JND7 137 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CENPVL3A0A0U1RRI6 287 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF724A8MTY0 619 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 DCTN6O00399 190 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OR7A17O14581 309 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 MPZL2O60487 215 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 RAMP2O60895 175 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 NFATC1O95644 943 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 HAND1O96004 215 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OPN1SWP03999 348 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 GAPDHP04406 335 aaKnown RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 OR5G3P0C626 314 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 GKN3PP0CG01 181 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 HKR1P10072 659 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 GZMBP10144 247 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 ACP2P11117 423 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 HIST1H1TP22492 207 aaPredicted RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CHATP28329 748 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 CDAP32320 146 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 HCCSP53701 268 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 NDUFA6P56556 154 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 BTG1P62324 171 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 RHOBP62745 196 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 POLR2LP62875 67 aaKnown RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 RPS27AP62979 156 aaKnown RBP2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 BTG2P78543 158 aa2.71□□□□□ -1.98
SNRNP48-202ENST00000496946 NTHL1P78549 312 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms