RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 HMGN1P05114 100 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 CFL1P23528 166 aaKnown RBP12.49□□□□□ -0.41
NEK4-206ENST00000496822 GNALP38405 381 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 MTNR1AP48039 350 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 PSMA6P60900 246 aaKnown RBP12.49□□□□□ -0.41
NEK4-206ENST00000496822 RPS7P62081 194 aaKnown RBP12.49□□□□□ -0.41
NEK4-206ENST00000496822 APOFQ13790 326 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 ZNF454Q8N9F8 522 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 RBM4BQ9BQ04 359 aaKnown RBP12.49□□□□□ -0.41
NEK4-206ENST00000496822 GABARAPL1Q9H0R8 117 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 LRP12Q9Y561 859 aa12.49□□□□□ -0.41
NEK4-206ENST00000496822 PSMD9O00233 223 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 CDIPTO14735 213 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 TMPRSS2O15393 492 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 HOXA3O43365 443 aaPredicted RBP12.48□□□□□ -0.41
NEK4-206ENST00000496822 NDUFA2O43678 99 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 MRPL3P09001 348 aaKnown RBP12.48□□□□□ -0.41
NEK4-206ENST00000496822 ALOX5APP20292 161 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 FOXL1Q12952 345 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 PRDX4Q13162 271 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 WDR38Q5JTN6 314 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 SLC35D3Q5M8T2 416 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 GPR157Q5UAW9 335 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 CD276Q5ZPR3 534 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 BTN2A1Q7KYR7 527 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.48□□□□□ -0.41
NEK4-206ENST00000496822 FAM216BQ8N7L0 139 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 CSNK2A3Q8NEV1 391 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 HPSE2Q8WWQ2 592 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 ST8SIA4Q92187 359 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 SLC25A28Q96A46 364 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 WDFY2Q96P53 400 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 CCL13Q99616 98 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 CIB1Q99828 191 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 TTTY10Q9BZA0 68 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 SIRPDQ9H106 197 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 TLNRD1Q9H1K6 362 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 RGCCQ9H4X1 137 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 TVP23BQ9NYZ1 205 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 KAAG1Q9UBP8 84 aa12.48□□□□□ -0.41
NEK4-206ENST00000496822 ZNF850A8MQ14 1090 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 SRRM5B3KS81 715 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 M0R129 80 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 P2RY10O00398 339 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 CASQ2O14958 399 aaPredicted RBP12.47□□□□□ -0.41
NEK4-206ENST00000496822 TOX4O94842 621 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 TFF1P04155 84 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 SELLP14151 372 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 AMY2BP19961 511 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 DAPP51397 102 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 GMFBP60983 142 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 FAHD1Q6P587 224 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 ZBTB49Q6ZSB9 765 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 BCDIN3DQ7Z5W3 292 aaKnown RBP12.47□□□□□ -0.41
NEK4-206ENST00000496822 GALNT4Q8N4A0 578 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 PACRGLQ8N7B6 248 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 RPL3LQ92901 407 aaKnown RBP12.47□□□□□ -0.41
NEK4-206ENST00000496822 MICU1Q9BPX6 476 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 ZNF747Q9BV97 191 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 PRDM13Q9H4Q3 707 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 PAPOLBQ9NRJ5 636 aaKnown RBP12.47□□□□□ -0.41
NEK4-206ENST00000496822 KRT84Q9NSB2 600 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 LAMP5Q9UJQ1 280 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 COPS3Q9UNS2 423 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 MPC1Q9Y5U8 109 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 DOCK11Q5JSL3 2073 aa12.47□□□□□ -0.41
NEK4-206ENST00000496822 CENPVL3A0A0U1RRI6 287 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 ANXA2P2A6NMY6 339 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 PRKYO43930 277 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 MITFO75030 526 aaPredicted RBP12.46□□□□□ -0.41
NEK4-206ENST00000496822 MUC1P15941 1255 aaPredicted RBP12.46□□□□□ -0.41
NEK4-206ENST00000496822 CRISP1P54107 249 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 ARF6P62330 175 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 IL5RAQ01344 420 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 SNAPC1Q16533 368 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 MICBQ29980 383 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 STUMQ69YW2 141 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 KRT77Q7Z794 578 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 PNLDC1Q8NA58 520 aaKnown RBP12.46□□□□□ -0.41
NEK4-206ENST00000496822 OR5T2Q8NGG2 359 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 OR5P3Q8WZ94 311 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 LHX4Q969G2 390 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 RTL8AQ9BWD3 113 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 WDR13Q9H1Z4 485 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 UNKLQ9H9P5 680 aaKnown RBP12.46□□□□□ -0.41
NEK4-206ENST00000496822 TNFRSF19Q9NS68 423 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 FAM206AQ9NX38 181 aa12.46□□□□□ -0.41
NEK4-206ENST00000496822 RPUSD1Q9UJJ7 312 aaKnown RBP12.46□□□□□ -0.41
NEK4-206ENST00000496822 SPRY1O43609 319 aaPredicted RBP12.45□□□□□ -0.42
NEK4-206ENST00000496822 CST4P01036 141 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 LIPFP07098 398 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 OMGP23515 440 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 DCTDP32321 178 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 ALDH3A2P51648 485 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 IKZF1Q13422 519 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 DMRTC1Q5HYR2 192 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 METTL11BQ5VVY1 283 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 KCTD8Q6ZWB6 473 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 FTMTQ8N4E7 242 aa12.45□□□□□ -0.42
NEK4-206ENST00000496822 CBR4Q8N4T8 237 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms