RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 OR5P3Q8WZ94 311 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 GCDHQ92947 438 aaPredicted RBP13.06□□□□□ -0.32
HDAC4-213ENST00000496347 LYZL4Q96KX0 146 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 PKP2Q99959 881 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 OSBPL10Q9BXB5 764 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 GABARAPL3Q9BY60 117 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 SMURF1Q9HCE7 757 aa13.06□□□□□ -0.32
HDAC4-213ENST00000496347 ZNF816-ZNF321PA0A0X1KG74 233 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-213ENST00000496347 MITFO75030 526 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-213ENST00000496347 ECDO95905 644 aaPredicted RBP13.05□□□□□ -0.32
HDAC4-213ENST00000496347 PRTN3P24158 256 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 RIDAP52758 137 aaKnown RBP13.05□□□□□ -0.32
HDAC4-213ENST00000496347 FGF12P61328 243 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 EFNB1P98172 346 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 ZBTB37Q5TC79 503 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 GPR157Q5UAW9 335 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 AADACL4Q5VUY2 407 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 MEPCEQ7L2J0 689 aaKnown RBP13.05□□□□□ -0.32
HDAC4-213ENST00000496347 COMMD2Q86X83 199 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 OR10Z1Q8NGY1 313 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 HPSE2Q8WWQ2 592 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 CIB1Q99828 191 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 ADGRL4Q9HBW9 690 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 HAO2Q9NYQ3 351 aa13.05□□□□□ -0.32
HDAC4-213ENST00000496347 NUFIP1Q9UHK0 495 aaKnown RBP13.05□□□□□ -0.32
HDAC4-213ENST00000496347 ZNF850A8MQ14 1090 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 PRR32B1ATL7 298 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 ZNF879B4DU55 563 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 M0R129 80 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 IGLV3-1P01715 115 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 EPHA2P29317 976 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 MAP2K3P46734 347 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 FAM76BQ5HYJ3 339 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 METTL11BQ5VVY1 283 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 STUMQ69YW2 141 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 ZNF322Q6U7Q0 402 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-213ENST00000496347 SLC36A1Q7Z2H8 476 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 SLC35F2Q8IXU6 374 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 BCL6BQ8N143 479 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-213ENST00000496347 TCEANCQ8N8B7 351 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 CENPNQ96H22 339 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-213ENST00000496347 ZNF48Q96MX3 618 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-213ENST00000496347 PBOV1Q9GZY1 135 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 DNTTIP1Q9H147 329 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 CLN6Q9NWW5 311 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 H2AFY2Q9P0M6 372 aaPredicted RBP13.04□□□□□ -0.32
HDAC4-213ENST00000496347 IKZF2Q9UKS7 526 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 OAZ3Q9UMX2 235 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 COPS3Q9UNS2 423 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 MGAM2Q2M2H8 2515 aa13.04□□□□□ -0.32
HDAC4-213ENST00000496347 IGHV3OR15-7A0A075B7D8 119 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 NKX6-3A6NJ46 265 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 OR5B21A6NL26 309 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 PSMD9O00233 223 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 P2RY10O00398 339 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 DVL1O14640 695 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 CDIPTO14735 213 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 GPR37O15354 613 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 RNASE1P07998 156 aaKnown RBP13.03□□□□□ -0.32
HDAC4-213ENST00000496347 HCCSP53701 268 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 CXCR4P61073 352 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 ACTR3P61158 418 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 GNG3P63215 75 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 EGR3Q06889 387 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 POU4F2Q12837 409 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 BAMBIQ13145 260 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 WDR38Q5JTN6 314 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 KCTD8Q6ZWB6 473 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 AMIGO2Q86SJ2 522 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 LRTOMTQ8WZ04 291 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 SLC25A28Q96A46 364 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 DMRTB1Q96MA1 342 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 C1orf147Q96MC9 270 aaPredicted RBP13.03□□□□□ -0.32
HDAC4-213ENST00000496347 PPP1R3EQ9H7J1 279 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 GPR84Q9NQS5 396 aa13.03□□□□□ -0.32
HDAC4-213ENST00000496347 WARS2Q9UGM6 360 aaKnown RBP13.03□□□□□ -0.32
HDAC4-213ENST00000496347 IGHV3OR16-10A0A075B7F0 116 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 DHRS7CA6NNS2 312 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 ZNF670-ZNF695F2Z2N8 137 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 LOC110117498-PIK3R3F6TDL0 507 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 MTRF1O75570 445 aaKnown RBP13.02□□□□□ -0.33
HDAC4-213ENST00000496347 DHRS3O75911 302 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 TOX4O94842 621 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 MMP9P14780 707 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 CFPP27918 469 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 MFGE8Q08431 387 aaPredicted RBP13.02□□□□□ -0.33
HDAC4-213ENST00000496347 RIPPLY1Q0D2K3 151 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 CEACAM21Q3KPI0 293 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 BCL2L15Q5TBC7 163 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 ASRGL1Q7L266 308 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 THAP5Q7Z6K1 395 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 SCCPDHQ8NBX0 429 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 OR51E1Q8TCB6 317 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 ST8SIA4Q92187 359 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 PIGCQ92535 297 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 RPL3LQ92901 407 aaKnown RBP13.02□□□□□ -0.33
HDAC4-213ENST00000496347 RNF170Q96K19 258 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 WDFY2Q96P53 400 aa13.02□□□□□ -0.33
HDAC4-213ENST00000496347 RAB3IPQ96QF0 476 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms