RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 A0A1W2PNU3 283 aaPredicted RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 CIB4A0PJX0 185 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 A6NL46 340 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 SNRPGP15A8MWD9 76 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 RPL36A-HNRNPH2H7BZ11 118 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 ZNF780AO75290 641 aaPredicted RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 CRTAPO75718 401 aaPredicted RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 MPIG6BO95866 241 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 RLN1P04808 185 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 SERPINA5P05154 406 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 TMIGD3P0DMS9 266 aaPredicted RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 CEACAM1P13688 526 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 PRF1P14222 555 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 CPN1P15169 458 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 ABOP16442 354 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 KLK2P20151 261 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 HOXC12P31275 282 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 APLNRP35414 380 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 EIF2S3P41091 472 aaKnown RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 CCR6P51684 374 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 ATP1B3P54709 279 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 CLDN18P56856 261 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 PPA1Q15181 289 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 KCNJ8Q15842 424 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 GSG1Q2KHT4 349 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 PHYHD1Q5SRE7 291 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 CLVS2Q5SYC1 327 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 ZBTB37Q5TC79 503 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 SFRP4Q6FHJ7 346 aaPredicted RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 ZNF529Q6P280 563 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 GLIPR1L1Q6UWM5 242 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 GLDNQ6ZMI3 551 aaPredicted RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 DNM1P46Q6ZS02 220 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 TRAPPC6BQ86SZ2 158 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 WDFY1Q8IWB7 410 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 GABRG1Q8N1C3 465 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 OR4D6Q8NGJ1 314 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 OR4C16Q8NGL9 310 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 OR10R2Q8NGX6 335 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 GPX8Q8TED1 209 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 TNFAIP8L1Q8WVP5 186 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 MED30Q96HR3 178 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 ZNF845Q96IR2 970 aaPredicted RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 SCGB3A2Q96PL1 93 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 RSRP1Q9BUV0 290 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 OR2H1Q9GZK4 316 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 METTL9Q9H1A3 318 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 OR10A4Q9H209 315 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 TP63Q9H3D4 680 aaPredicted RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 HEATR1Q9H583 2144 aaKnown RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 CALHM2Q9HA72 323 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 BCO1Q9HAY6 547 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 ELL3Q9HB65 397 aaPredicted RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 PARD6AQ9NPB6 346 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 PLA2G3Q9NZ20 509 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 MRPL15Q9P015 296 aaKnown RBP6.06□□□□□ -1.44
USP39-219ENST00000496047 KLK11Q9UBX7 282 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 ZNF69Q9UC07 566 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 ASPMQ8IZT6 3477 aa6.06□□□□□ -1.44
USP39-219ENST00000496047 A0A0B4J293 547 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 ZNF816-ZNF321PA0A0X1KG74 233 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 SLC22A20A6NK97 555 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 A8MV72 311 aaPredicted RBP6.05□□□□□ -1.44
USP39-219ENST00000496047 TMEM14DPA8MWL7 114 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 H3BUI4 141 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 LDLRAD4O15165 306 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 SYNGR3O43761 229 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 CDC14BO60729 498 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 IGLV3-1P01715 115 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 AMY2AP04746 511 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 FAHP16930 419 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 CRYGSP22914 178 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 RFC3P40938 356 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 ECI1P42126 302 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 ALDH3B1P43353 468 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 VEGFCP49767 419 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 NOVA1P51513 510 aaKnown RBP6.05□□□□□ -1.44
USP39-219ENST00000496047 CCL11P51671 97 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 EFNB2P52799 333 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 TAS2R31P59538 309 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 TGFBR3Q03167 851 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 CD300CQ08708 224 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 FAPQ12884 760 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 MRPL49Q13405 166 aaKnown RBP6.05□□□□□ -1.44
USP39-219ENST00000496047 ARFRP1Q13795 201 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 GK2Q14410 553 aaPredicted RBP6.05□□□□□ -1.44
USP39-219ENST00000496047 CDK10Q15131 360 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 KISS1Q15726 138 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 LINC00303Q3SY05 128 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 ASPHD2Q6ICH7 369 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 ZNF774Q6NX45 483 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 MTFR2Q6P444 385 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 C11orf88Q6PI97 169 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 C20orf204Q6ZNR8 217 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 Q6ZSR3 168 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 MRPL21Q7Z2W9 205 aaKnown RBP6.05□□□□□ -1.44
USP39-219ENST00000496047 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.05□□□□□ -1.44
USP39-219ENST00000496047 FJX1Q86VR8 437 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 BPIFB2Q8N4F0 458 aa6.05□□□□□ -1.44
USP39-219ENST00000496047 ZADH2Q8N4Q0 377 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms