RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	TTTY10	Q9BZA0	68 aa		10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	RNPEPL1	Q9HAU8	725 aa		10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	LPAR2	Q9HBW0	351 aa		10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	G6PC2	Q9NQR9	355 aa		10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	GPR84	Q9NQS5	396 aa		10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	C1orf123	Q9NWV4	160 aa		10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	MIOX	Q9UGB7	285 aa		10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	OR52A1	Q9UKL2	312 aa		10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	EXOG	Q9Y2C4	368 aa	Known RBP	10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899	YLPM1	P49750	1951 aa	Known RBP	10.37	□□□□□ -0.75
MRPL55-233	ENST00000495899		A0A0G2JMP0	313 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899		A0A0X1KG70	313 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	TMEM210	A6NLX4	147 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	DHRS7C	A6NNS2	312 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	ZNF850	A8MQ14	1090 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	CEACAM18	A8MTB9	384 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899		F5H0A9	414 aa	Predicted RBP	10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899		J3QLI3	93 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	MAGEB4	O15481	346 aa	Predicted RBP	10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	NDUFA2	O43678	99 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	APOL3	O95236	402 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	LHB	P01229	141 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	SRD5A1	P18405	259 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	RBMX	P38159	391 aa	Known RBP	10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	MFGE8	Q08431	387 aa	Predicted RBP	10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	HNRNPA0	Q13151	305 aa	Known RBP	10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	PRDX4	Q13162	271 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	RCN1	Q15293	331 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	DCDC5	Q6ZRR9	648 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899		Q6ZSR3	168 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	THAP5	Q7Z6K1	395 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	COMMD2	Q86X83	199 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	PRIMA1	Q86XR5	153 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	CCDC54	Q8NEL0	328 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	OR1M1	Q8NGA1	313 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	OR4M2	Q8NGB6	313 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	PIGC	Q92535	297 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	DVL3	Q92997	716 aa	Predicted RBP	10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	MRPL48	Q96GC5	212 aa	Known RBP	10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	FAHD2A	Q96GK7	314 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	TMEM246	Q9BRR3	403 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	TLNRD1	Q9H1K6	362 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	LRCH1	Q9Y2L9	728 aa		10.36	□□□□□ -0.75
MRPL55-233	ENST00000495899	SON	P18583	2426 aa	Known RBP	10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	TRAV38-1	A0A0B4J264	116 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	DAPL1	A0PJW8	107 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899		A6NLC8	198 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899		A8MXK9	166 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	LGALS8	O00214	317 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	DLGAP1	O14490	977 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	DHRS3	O75911	302 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	FADS2	O95864	444 aa	Known RBP	10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	ZFP36	P26651	326 aa	Known RBP	10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	ISL1	P61371	349 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	LCN2	P80188	198 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	ZNF85	Q03923	595 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	ZNF154	Q13106	437 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	CEACAM21	Q3KPI0	293 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	CDON	Q4KMG0	1287 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	ESCO2	Q56NI9	601 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	TTC23	Q5W5X9	447 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	LPCAT4	Q643R3	524 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	TREML4	Q6UXN2	200 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	NLRC3	Q7RTR2	1065 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	FAM220A	Q7Z4H9	259 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	CATSPERD	Q86XM0	798 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	C11orf53	Q8IXP5	236 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	ZDHHC23	Q8IYP9	409 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	ACBD7	Q8N6N7	88 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	RORB	Q92753	470 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	PPP1R14A	Q96A00	147 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	LGALS12	Q96DT0	336 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	NEIL1	Q96FI4	390 aa	Predicted RBP	10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	RNF170	Q96K19	258 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	FAM71F1	Q96KD3	344 aa	Predicted RBP	10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	DCLRE1B	Q9H816	532 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	MRPS18A	Q9NVS2	196 aa	Known RBP	10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	ENPP5	Q9UJA9	477 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	GTF2A1L	Q9UNN4	478 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	PIGL	Q9Y2B2	252 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	RPL36	Q9Y3U8	105 aa	Known RBP	10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899		V9GYS6	101 aa		10.35	□□□□□ -0.75
MRPL55-233	ENST00000495899	TANC2	Q9HCD6	1990 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899		A0A1B0GTI1	187 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	hCG_1807616	A0A1W2PRN6	198 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	OOEP	A6NGQ2	149 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	OR5B21	A6NL26	309 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899		H0YHG0	523 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	CASQ2	O14958	399 aa	Predicted RBP	10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	RPP14	O95059	124 aa	Known RBP	10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	ZNF205	O95201	554 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	DBT	P11182	482 aa	Known RBP	10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	RPS2	P15880	293 aa	Known RBP	10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	CCL1	P22362	96 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	PSMB10	P40306	273 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	ACTA2	P62736	377 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	ACTG2	P63267	376 aa		10.34	□□□□□ -0.75
MRPL55-233	ENST00000495899	ZNF91	Q05481	1191 aa		10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms