RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 CNN2Q99439 309 aaKnown RBP20.11■□□□□ 0.81
HLA-C-209ENST00000495835 DNTTIP1Q9H147 329 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 PRDM13Q9H4Q3 707 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 FAM206AQ9NX38 181 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 HAO2Q9NYQ3 351 aa20.11■□□□□ 0.81
HLA-C-209ENST00000495835 TRAV40A0A0B4J280 105 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 ZNF850A8MQ14 1090 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 P2RY10O00398 339 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 CDIPTO14735 213 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 CFPP27918 469 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 RIDAP52758 137 aaKnown RBP20.1■□□□□ 0.81
HLA-C-209ENST00000495835 HCCSP53701 268 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 FGF12P61328 243 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 HOXA4Q00056 320 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-209ENST00000495835 BAMBIQ13145 260 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 ATPAF1Q5TC12 328 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-209ENST00000495835 ZBTB37Q5TC79 503 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 GPR157Q5UAW9 335 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 AADACL4Q5VUY2 407 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 C12orf73Q69YU5 71 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 SLC36A1Q7Z2H8 476 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 ZNF48Q96MX3 618 aaPredicted RBP20.1■□□□□ 0.81
HLA-C-209ENST00000495835 OSBPL10Q9BXB5 764 aa20.1■□□□□ 0.81
HLA-C-209ENST00000495835 ZNF816-ZNF321PA0A0X1KG74 233 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 DVL1O14640 695 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 TMPRSS2O15393 492 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 EGR1P18146 543 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 CSNK2BP67870 215 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 ZNF829Q3KNS6 432 aaPredicted RBP20.09■□□□□ 0.81
HLA-C-209ENST00000495835 GID4Q8IVV7 300 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 ZDHHC23Q8IYP9 409 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 PIGCQ92535 297 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 SLC25A28Q96A46 364 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 PKP2Q99959 881 aa20.09■□□□□ 0.81
HLA-C-209ENST00000495835 DNAJC9-AS1A6NH13 148 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.08■□□□□ 0.81
HLA-C-209ENST00000495835 IGLV3-1P01715 115 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 RNASE1P07998 156 aaKnown RBP20.08■□□□□ 0.81
HLA-C-209ENST00000495835 MRPL3P09001 348 aaKnown RBP20.08■□□□□ 0.81
HLA-C-209ENST00000495835 HKR1P10072 659 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 FOXL1Q12952 345 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 TCEANCQ8N8B7 351 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 FAM81AQ8TBF8 368 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 RNF170Q96K19 258 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 PBOV1Q9GZY1 135 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 PPP1R3EQ9H7J1 279 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 MOB1AQ9H8S9 216 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 SMURF1Q9HCE7 757 aa20.08■□□□□ 0.81
HLA-C-209ENST00000495835 NUFIP1Q9UHK0 495 aaKnown RBP20.08■□□□□ 0.81
HLA-C-209ENST00000495835 MITFO75030 526 aaPredicted RBP20.07■□□□□ 0.8
HLA-C-209ENST00000495835 MTRF1O75570 445 aaKnown RBP20.07■□□□□ 0.8
HLA-C-209ENST00000495835 TOX4O94842 621 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 MMP9P14780 707 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 RIPPLY1Q0D2K3 151 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 PDCD1Q15116 288 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 CEACAM21Q3KPI0 293 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 METTL11BQ5VVY1 283 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 BTN2A1Q7KYR7 527 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 C3orf56Q8N813 242 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 SCCPDHQ8NBX0 429 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 CENPNQ96H22 339 aaPredicted RBP20.07■□□□□ 0.8
HLA-C-209ENST00000495835 WDFY2Q96P53 400 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 CLN6Q9NWW5 311 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 COPS3Q9UNS2 423 aa20.07■□□□□ 0.8
HLA-C-209ENST00000495835 CIB2O75838 187 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 EPHA2P29317 976 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 TGM4P49221 684 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 GNG3P63215 75 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 EGR3Q06889 387 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 WDR38Q5JTN6 314 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 ZNF322Q6U7Q0 402 aaPredicted RBP20.06■□□□□ 0.8
HLA-C-209ENST00000495835 AMIGO2Q86SJ2 522 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 OR5A2Q8NGI9 324 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 HPSE2Q8WWQ2 592 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 LRTOMTQ8WZ04 291 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 C1orf147Q96MC9 270 aaPredicted RBP20.06■□□□□ 0.8
HLA-C-209ENST00000495835 PCGF1Q9BSM1 259 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 RASSF4Q9H2L5 321 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 CNTD2Q9H8S5 307 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 NOX4Q9NPH5 578 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 IKZF2Q9UKS7 526 aa20.06■□□□□ 0.8
HLA-C-209ENST00000495835 IGHV3OR15-7A0A075B7D8 119 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 PSMD9O00233 223 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 CXCR4P61073 352 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 POU4F2Q12837 409 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 STUMQ69YW2 141 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 THAP5Q7Z6K1 395 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 SLC35F2Q8IXU6 374 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 RPL3LQ92901 407 aaKnown RBP20.05■□□□□ 0.8
HLA-C-209ENST00000495835 MED30Q96HR3 178 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 RAB3IPQ96QF0 476 aaPredicted RBP20.05■□□□□ 0.8
HLA-C-209ENST00000495835 CCL13Q99616 98 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 SIRPDQ9H106 197 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 ADGRL4Q9HBW9 690 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 WARS2Q9UGM6 360 aaKnown RBP20.05■□□□□ 0.8
HLA-C-209ENST00000495835 RPUSD1Q9UJJ7 312 aaKnown RBP20.05■□□□□ 0.8
HLA-C-209ENST00000495835 KPTNQ9Y664 436 aa20.05■□□□□ 0.8
HLA-C-209ENST00000495835 IGHV3OR16-10A0A075B7F0 116 aa20.04■□□□□ 0.8
HLA-C-209ENST00000495835 OR5B21A6NL26 309 aa20.04■□□□□ 0.8
HLA-C-209ENST00000495835 ZNF670-ZNF695F2Z2N8 137 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms