RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ACKR4Q9NPB9 350 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 TMEM100Q9NV29 134 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 EHFQ9NZC4 300 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 MTCH2Q9Y6C9 303 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 PI4KAP42356 2102 aa11.45□□□□□ -0.58
PTPN7-217ENST00000495688 IGHV3-15A0A0B4J1V0 119 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 PCP4L1A6NKN8 68 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF705EA8MWA4 302 aaPredicted RBP11.44□□□□□ -0.58
PTPN7-217ENST00000495688 RPS2P15880 293 aaKnown RBP11.44□□□□□ -0.58
PTPN7-217ENST00000495688 FAHP16930 419 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 IGFBP4P22692 258 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 SLC6A9P48067 706 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 PRSS12P56730 875 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 CLDN17P56750 224 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 S100A10P60903 97 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 UBE2V2Q15819 145 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 MST1LQ2TV78 715 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 SLC25A53Q5H9E4 307 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 PHYHD1Q5SRE7 291 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 PEG10Q86TG7 708 aaKnown RBP11.44□□□□□ -0.58
PTPN7-217ENST00000495688 LHFPL1Q86WI0 220 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 LRRC18Q8N456 261 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 OR6X1Q8NH79 312 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 SSC4DQ8WTU2 575 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 RNF141Q8WVD5 230 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 CPNE2Q96FN4 548 aaPredicted RBP11.44□□□□□ -0.58
PTPN7-217ENST00000495688 HRH4Q9H3N8 390 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 RAB18Q9NP72 206 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF629Q9UEG4 869 aaPredicted RBP11.44□□□□□ -0.58
PTPN7-217ENST00000495688 OR5H15A6NDH6 313 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF726A6NNF4 738 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 CEACAM18A8MTB9 384 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 SIGLEC6O43699 453 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF205O95201 554 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 HPNP05981 417 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 RCC1P18754 421 aaPredicted RBP11.44□□□□□ -0.58
PTPN7-217ENST00000495688 FPR2P25090 351 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 PTGFRP43088 359 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 CYCSP99999 105 aaKnown RBP11.44□□□□□ -0.58
PTPN7-217ENST00000495688 SCRN3Q0VDG4 424 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 HDHD3Q9BSH5 251 aaPredicted RBP11.44□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF576Q9H609 170 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 ELL3Q9HB65 397 aaPredicted RBP11.44□□□□□ -0.58
PTPN7-217ENST00000495688 PISDQ9UG56 409 aa11.44□□□□□ -0.58
PTPN7-217ENST00000495688 PMS2P1A4D2B8 440 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 SFTPBP07988 381 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 CELA2AP08217 269 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 DBHP09172 617 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 HIST3H3Q16695 136 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 H3F3CQ6NXT2 135 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 PRSS54Q6PEW0 395 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 DOK3Q7L591 496 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 CPEB2Q7Z5Q1 589 aaKnown RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 KMT5CQ86Y97 462 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 SVBPQ8N300 66 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 PIGTQ969N2 578 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 ARL11Q969Q4 196 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 PGAM5Q96HS1 289 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 OXGR1Q96P68 337 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 RASL10BQ96S79 203 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 SPSB2Q99619 263 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 CDC6Q99741 560 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 URM1Q9BTM9 101 aaKnown RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 CRB3Q9BUF7 120 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 SLC26A1Q9H2B4 701 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 TREM1Q9NP99 234 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF701Q9NV72 531 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 OSGIN2Q9Y236 505 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 BCAT2O15382 392 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 NDUFA2O43678 99 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 PRKACAP17612 351 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 CCL1P22362 96 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 NPBWR1P48145 328 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 ACY1Q03154 408 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 GUSBP11Q6P575 273 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 HAGHLQ6PII5 290 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 C6orf201Q7Z4U5 140 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF775Q96BV0 537 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF581Q9P0T4 197 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 ZFAND5O76080 213 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 MSX1P28360 303 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 AFF3P51826 1226 aaKnown RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 DCDP81605 110 aaKnown RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 NAAAQ02083 359 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 PNLIPRP3Q17RR3 467 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 RSPO1Q2MKA7 263 aaPredicted RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 HFEQ30201 348 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 RPL7L1Q6DKI1 246 aaKnown RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 RABEPKQ7Z6M1 372 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 FAM89BQ8N5H3 189 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 OR5L2Q8NGL0 311 aa11.43□□□□□ -0.58
PTPN7-217ENST00000495688 MCTS1Q9ULC4 181 aaKnown RBP11.43□□□□□ -0.58
PTPN7-217ENST00000495688 FCGR2AP12318 317 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 PTGER4P35408 488 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 ID4P47928 161 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 SHBQ15464 509 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 ACTBL2Q562R1 376 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 OR2A2Q6IF42 318 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 Q7L0L9 218 aa11.42□□□□□ -0.58
PTPN7-217ENST00000495688 ZNF385AQ96PM9 386 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms