RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 OR13C3Q8NGS6 347 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 RPS4Y2Q8TD47 263 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 C10orf105Q8TEF2 133 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 PP6455Q8WZ26 134 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 CCL17Q92583 94 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 HPS1Q92902 700 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 TECTBQ96PL2 329 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 PDCD1LG2Q9BQ51 273 aa14.49□□□□□ -0.09
HDAC6-235ENST00000495515 ANKRD61A6NGH8 418 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 TMEM210A6NLX4 147 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 H3BSH0 61 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 IRF2P14316 349 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 GIFP27352 417 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 MAB21L1Q13394 359 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 CEACAM21Q3KPI0 293 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 PLCXD3Q63HM9 321 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 DMKNQ6E0U4 476 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-235ENST00000495515 XAF1Q6GPH4 301 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 MOB3CQ70IA8 216 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 PEG10Q86TG7 708 aaKnown RBP14.48□□□□□ -0.09
HDAC6-235ENST00000495515 OR11L1Q8NGX0 322 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 GPR148Q8TDV2 347 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 TSEN15Q8WW01 171 aaKnown RBP14.48□□□□□ -0.09
HDAC6-235ENST00000495515 OR5P3Q8WZ94 311 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 DVL3Q92997 716 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-235ENST00000495515 ITPKCQ96DU7 683 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 TIMD4Q96H15 378 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 RNF170Q96K19 258 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 FN3KRPQ9HA64 309 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 DHDHQ9UQ10 334 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 LRCH1Q9Y2L9 728 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 ZNF281Q9Y2X9 895 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 CSMD1Q96PZ7 3565 aa14.48□□□□□ -0.09
HDAC6-235ENST00000495515 OR5B21A6NL26 309 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 CLDN25C9JDP6 229 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 LYNX1G3V0Z9 82 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 RP2O75695 350 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 PTBP3O95758 552 aaKnown RBP14.47□□□□□ -0.09
HDAC6-235ENST00000495515 LALBAP00709 142 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 CD1AP06126 327 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 CD2P06729 351 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 LYNX1P0DP58 116 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 GPR6P46095 362 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-235ENST00000495515 TBCEQ15813 527 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-235ENST00000495515 TMEM42Q69YG0 159 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 KCTD8Q6ZWB6 473 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 MOGAT3Q86VF5 341 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 TGIF2LYQ8IUE0 185 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 C1orf87Q8N0U7 546 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 OR5A2Q8NGI9 324 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 GHSRQ92847 366 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 YIPF5Q969M3 257 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 CHST5Q9GZS9 411 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 NEK6Q9HC98 313 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 GCM1Q9NP62 436 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 ZNF275Q9NSD4 429 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-235ENST00000495515 TMEM106BQ9NUM4 274 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 SLC7A11Q9UPY5 501 aa14.47□□□□□ -0.09
HDAC6-235ENST00000495515 LSM2Q9Y333 95 aaKnown RBP14.47□□□□□ -0.09
HDAC6-235ENST00000495515 A6NLC8 198 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 PPIHO43447 177 aaKnown RBP14.46□□□□□ -0.09
HDAC6-235ENST00000495515 PLPP2O43688 288 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 GRPP07492 148 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 CELP19835 753 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 GNG3P63215 75 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 RIN1Q13671 783 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 CNN3Q15417 329 aaKnown RBP14.46□□□□□ -0.09
HDAC6-235ENST00000495515 ZNF181Q2M3W8 571 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 KCTD21Q4G0X4 260 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 SPRNQ5BIV9 151 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 YIF1BQ5BJH7 314 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 CEP78Q5JTW2 689 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 ZFP41Q8N8Y5 198 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 Q8TCH9 128 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 THRSPQ92748 146 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 RAB1CQ92928 201 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 FGGYQ96C11 551 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 OR5M11Q96RB7 305 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 ISYNA1Q9NPH2 558 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 TREM2Q9NZC2 230 aa14.46□□□□□ -0.09
HDAC6-235ENST00000495515 SIRT4Q9Y6E7 314 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-235ENST00000495515 F8P00451 2351 aa14.46□□□□□ -0.1
HDAC6-235ENST00000495515 CSMD2Q7Z408 3487 aa14.46□□□□□ -0.1
HDAC6-235ENST00000495515 IGHV4-30-2A0A087WSY4 118 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 IGHV3-64DA0A0J9YX35 117 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 LOC100289279A0A1B0GTE1 492 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 A6NIN4 97 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 OCM2P0CE71 109 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 OCMP0CE72 109 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-235ENST00000495515 HSMCR30P0CW71 290 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 NR4A2P43354 598 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 PRRC2AP48634 2157 aaKnown RBP14.45□□□□□ -0.1
HDAC6-235ENST00000495515 CHN2P52757 468 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 GPR50Q13585 617 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 PRAMEF6Q5VXH4 476 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 UTS2BQ765I0 119 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 ZNF367Q7RTV3 350 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 OR1M1Q8NGA1 313 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 OR51A4Q8NGJ6 313 aa14.45□□□□□ -0.1
HDAC6-235ENST00000495515 OR5D14Q8NGL3 314 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms