RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LURAP1LQ8IV03 231 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 ZDHHC23Q8IYP9 409 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 FTMTQ8N4E7 242 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 CELF2-AS1Q8N7Q2 184 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 OR10AC1Q8NH08 325 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 OR5P3Q8WZ94 311 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 GPR173Q9NS66 373 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 SCN3BQ9NY72 215 aa16.38■□□□□ 0.21
HDAC4-212ENST00000495497 SIRT4Q9Y6E7 314 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-212ENST00000495497 TMEM178BH3BS89 294 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 CDK1P06493 297 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 CSNK2BP67870 215 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 MED21Q13503 144 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 DOC2BQ14184 412 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 FAM201AQ5SY85 155 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 TMEM244Q5VVB8 128 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 KRT74Q7RTS7 529 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 EGFL6Q8IUX8 553 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 ZNF676Q8N7Q3 588 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 OR1M1Q8NGA1 313 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 OR51A4Q8NGJ6 313 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 CLDND2Q8NHS1 167 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 RNF170Q96K19 258 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 MICU1Q9BPX6 476 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 PDCD1LG2Q9BQ51 273 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 C14orf119Q9NWQ9 140 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 C1orf123Q9NWV4 160 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 BABAM2Q9NXR7 383 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 ERVK-18Q9QC07 812 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 NPTNQ9Y639 398 aa16.37■□□□□ 0.21
HDAC4-212ENST00000495497 FLNAP21333 2647 aaKnown RBP16.37■□□□□ 0.21
HDAC4-212ENST00000495497 F8P00451 2351 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 ANXA2P2A6NMY6 339 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 PTBP3O95758 552 aaKnown RBP16.36■□□□□ 0.21
HDAC4-212ENST00000495497 NRASP01111 189 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 SLC3A1Q07837 685 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 ZBTB37Q5TC79 503 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 PLCXD3Q63HM9 321 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 KCTD8Q6ZWB6 473 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 C11orf53Q8IXP5 236 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 ZNF485Q8NCK3 441 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 OR52N1Q8NH53 320 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 RAB1CQ92928 201 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 TIMD4Q96H15 378 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 HIST1H2AAQ96QV6 131 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 RTL8AQ9BWD3 113 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 FN3KRPQ9HA64 309 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 UBAP1Q9NZ09 502 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 ACANP16112 2415 aa16.36■□□□□ 0.21
HDAC4-212ENST00000495497 TRBV2A0A0J9YWF9 115 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 ISPDA4D126 451 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 A6NLC8 198 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 ZFPL1O95159 310 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 LY6G6DO95868 133 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 IGHV2-70P01814 119 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 ISG15P05161 165 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 CCDC159P0C7I6 412 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 TGM4P49221 684 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 GPM6AP51674 278 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 CHN2P52757 468 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 MZT1Q08AG7 82 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 MRPL28Q13084 256 aaKnown RBP16.35■□□□□ 0.21
HDAC4-212ENST00000495497 ZNF154Q13106 437 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 TMEM249Q2WGJ8 235 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 CLVS2Q5SYC1 327 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 TMEM42Q69YG0 159 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 Q71RC1 249 aaPredicted RBP16.35■□□□□ 0.21
HDAC4-212ENST00000495497 ZFP41Q8N8Y5 198 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 BOLLQ8N9W6 283 aaKnown RBP16.35■□□□□ 0.21
HDAC4-212ENST00000495497 C19orf18Q8NEA5 215 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 OR5AK2Q8NH90 309 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 Q8TCH9 128 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 MYDGFQ969H8 173 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 METTL17Q9H7H0 456 aaPredicted RBP16.35■□□□□ 0.21
HDAC4-212ENST00000495497 PLEKHA1Q9HB21 404 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 TPRKBQ9Y3C4 175 aa16.35■□□□□ 0.21
HDAC4-212ENST00000495497 DYSFO75923 2080 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 DHRS7CA6NNS2 312 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 ZNF732B4DXR9 585 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 C3orf80F5H4A9 247 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 CDIPTO14735 213 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 MYL12BO14950 172 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 DENRO43583 198 aaKnown RBP16.34■□□□□ 0.21
HDAC4-212ENST00000495497 CRHBPP24387 322 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 SLC35A2P78381 396 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 KRTAP1-1Q07627 177 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 CDK5R1Q15078 307 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 ZMYND11Q15326 602 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 CEACAM21Q3KPI0 293 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 RPL22L1Q6P5R6 122 aaKnown RBP16.34■□□□□ 0.21
HDAC4-212ENST00000495497 PEG10Q86TG7 708 aaKnown RBP16.34■□□□□ 0.21
HDAC4-212ENST00000495497 NANOGP1Q8N7R0 232 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 OR11L1Q8NGX0 322 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 RPL3LQ92901 407 aaKnown RBP16.34■□□□□ 0.21
HDAC4-212ENST00000495497 ITFG2Q969R8 447 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 ERGIC1Q969X5 290 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 FGGYQ96C11 551 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 ADAT3Q96EY9 351 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-212ENST00000495497 ABCB9Q9NP78 766 aa16.34■□□□□ 0.21
HDAC4-212ENST00000495497 RNF7Q9UBF6 113 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms