RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 SRYQ05066 204 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 RNFT1Q5M7Z0 435 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 TSPO2Q5TGU0 170 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.16□□□□□ -0.14
CBX4-204ENST00000495122 MRGPRGQ86SM5 289 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 OR52N4Q8NGI2 321 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 OR4D6Q8NGJ1 314 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 KCNG3Q8TAE7 436 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 GPX8Q8TED1 209 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 AKAP1Q92667 903 aaKnown RBP eCLIP14.16□□□□□ -0.14
CBX4-204ENST00000495122 SPSB1Q96BD6 273 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 ZNF837Q96EG3 531 aaPredicted RBP14.16□□□□□ -0.14
CBX4-204ENST00000495122 WDYHV1Q96HA8 205 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 PRDM14Q9GZV8 571 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 ZNF319Q9P2F9 582 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 ADGRG4Q8IZF6 3080 aa14.16□□□□□ -0.14
CBX4-204ENST00000495122 INTS1Q8N201 2190 aaKnown RBP14.15□□□□□ -0.14
CBX4-204ENST00000495122 A0A0B4J293 547 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 MMP7P09237 267 aaPredicted RBP14.15□□□□□ -0.14
CBX4-204ENST00000495122 H2AFB2P0C5Z0 115 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 SLC2A1P11166 492 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 PSMB1P20618 241 aaKnown RBP14.15□□□□□ -0.14
CBX4-204ENST00000495122 ARR3P36575 388 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 HTR5AP47898 357 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 CASP6P55212 293 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 RRAS2P62070 204 aaPredicted RBP14.15□□□□□ -0.14
CBX4-204ENST00000495122 PSG4Q00888 419 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 ARL6IP1Q15041 203 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 SP5Q6BEB4 398 aaPredicted RBP14.15□□□□□ -0.14
CBX4-204ENST00000495122 TUSC5Q8IXB3 177 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 TCTE3Q8IZS6 198 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 FNDC9Q8TBE3 224 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 WNT5BQ9H1J7 359 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 NUDT15Q9NV35 164 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 UPB1Q9UBR1 384 aa14.15□□□□□ -0.14
CBX4-204ENST00000495122 TACC2O95359 2948 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 AQP7O14520 342 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 MELTFP08582 738 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 HCKP08631 526 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 AKAIN1P0CW23 69 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 TMIGD3P0DMS9 266 aaPredicted RBP14.14□□□□□ -0.15
CBX4-204ENST00000495122 PRKACBP22694 351 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 GIFP27352 417 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 MECP2P51608 486 aaKnown RBP14.14□□□□□ -0.15
CBX4-204ENST00000495122 PMPCAQ10713 525 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 CNN3Q15417 329 aaKnown RBP14.14□□□□□ -0.15
CBX4-204ENST00000495122 TBRG1Q3YBR2 411 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 AWAT2Q6E213 333 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 ZNF774Q6NX45 483 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 TMEM53Q6P2H8 277 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 SKA3Q8IX90 412 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 TMEM229BQ8NBD8 167 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 SEMA6DQ8NFY4 1073 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 UBASH3BQ8TF42 649 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 ZNF775Q96BV0 537 aaPredicted RBP14.14□□□□□ -0.15
CBX4-204ENST00000495122 MED30Q96HR3 178 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 GMPPAQ96IJ6 420 aaPredicted RBP14.14□□□□□ -0.15
CBX4-204ENST00000495122 ST6GAL2Q96JF0 529 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 LYZL4Q96KX0 146 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 CST11Q9H112 138 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 OPA3Q9H6K4 179 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 SLC7A10Q9NS82 523 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 ING3Q9NXR8 418 aa14.14□□□□□ -0.15
CBX4-204ENST00000495122 MRPS28Q9Y2Q9 187 aaKnown RBP14.14□□□□□ -0.15
CBX4-204ENST00000495122 CSMD1Q96PZ7 3565 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 SLC22A20A6NK97 555 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 PEX14O75381 377 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 MT-ND4P03905 459 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 GSTP1P09211 210 aaKnown RBP14.13□□□□□ -0.15
CBX4-204ENST00000495122 VSIG8P0DPA2 414 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 ABOP16442 354 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 TBPP20226 339 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 AGAP20933 346 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 RCVRNP35243 200 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 TAS2R19P59542 299 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 ARF1P84077 181 aaKnown RBP14.13□□□□□ -0.15
CBX4-204ENST00000495122 RIPPLY1Q0D2K3 151 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 PLA2G7Q13093 441 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 ZMYND11Q15326 602 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 RNASE12Q5GAN4 147 aaKnown RBP14.13□□□□□ -0.15
CBX4-204ENST00000495122 ATAD3CQ5T2N8 411 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 CD276Q5ZPR3 534 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 NANOS1Q8WY41 292 aaKnown RBP14.13□□□□□ -0.15
CBX4-204ENST00000495122 AQP3Q92482 292 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 SPSB4Q96A44 273 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 URM1Q9BTM9 101 aaKnown RBP14.13□□□□□ -0.15
CBX4-204ENST00000495122 C1QTNF5Q9BXJ0 243 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 KLK11Q9UBX7 282 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 MEMO1Q9Y316 297 aa14.13□□□□□ -0.15
CBX4-204ENST00000495122 ZNHIT1O43257 154 aa14.12□□□□□ -0.15
CBX4-204ENST00000495122 SS18L1O75177 396 aaPredicted RBP14.12□□□□□ -0.15
CBX4-204ENST00000495122 CNOT4O95628 575 aaKnown RBP14.12□□□□□ -0.15
CBX4-204ENST00000495122 TGM6O95932 706 aa14.12□□□□□ -0.15
CBX4-204ENST00000495122 SERPINA5P05154 406 aa14.12□□□□□ -0.15
CBX4-204ENST00000495122 NAT2P11245 290 aa14.12□□□□□ -0.15
CBX4-204ENST00000495122 SF3B4Q15427 424 aaKnown RBP eCLIP14.12□□□□□ -0.152e-23■■■■■ 28.5
CBX4-204ENST00000495122 CARTPTQ16568 116 aa14.12□□□□□ -0.15
CBX4-204ENST00000495122 PCGF3Q3KNV8 242 aa14.12□□□□□ -0.15
CBX4-204ENST00000495122 RTL6Q6ICC9 239 aa14.12□□□□□ -0.15
CBX4-204ENST00000495122 COLCA1Q6ZS62 124 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms