RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 GIMAP1Q8WWP7 306 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 DVL3Q92997 716 aaPredicted RBP14.32□□□□□ -0.12
ATG4B-225ENST00000494465 SPSB1Q96BD6 273 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 SARAFQ96BY9 339 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 TMEM59Q9BXS4 323 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 GHRLQ9UBU3 117 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 SOCS1O15524 211 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 PEX14O75381 377 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 CHRM2P08172 466 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 AKAIN1P0CW23 69 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 GNB3P16520 340 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 GTF3C1Q12789 2109 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 FOXC1Q12948 553 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 PLAC9Q5JTB6 97 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 CLVS2Q5SYC1 327 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 GABRG1Q8N1C3 465 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 TMEM229BQ8NBD8 167 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 CHST4Q8NCG5 386 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 SNIP1Q8TAD8 396 aaKnown RBP14.32□□□□□ -0.12
ATG4B-225ENST00000494465 TNFAIP8L1Q8WVP5 186 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 CYYR1Q96J86 154 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 ZNF75AQ96N20 296 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 SELENOIQ9C0D9 397 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 OR10A4Q9H209 315 aa14.32□□□□□ -0.12
ATG4B-225ENST00000494465 CRTAPO75718 401 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-225ENST00000494465 FAUP35544 74 aaKnown RBP14.31□□□□□ -0.12
ATG4B-225ENST00000494465 TMEM50BP56557 158 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 NHLH1Q02575 133 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 STEAP1BQ6NZ63 245 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 TMEM53Q6P2H8 277 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 FAM214BQ7L5A3 538 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 CDH24Q86UP0 819 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 FJX1Q86VR8 437 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 FAM89BQ8N5H3 189 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 C9orf106Q8NAJ2 232 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 DMRTB1Q96MA1 342 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 TP63Q9H3D4 680 aaPredicted RBP14.31□□□□□ -0.12
ATG4B-225ENST00000494465 ING4Q9UNL4 249 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 KCNK7Q9Y2U2 307 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 DMXL2Q8TDJ6 3036 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 APC2O95996 2303 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 ICMTO60725 284 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 NRASP01111 189 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 CCNOP22674 350 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 TAS2R19P59542 299 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 RPS27AP62979 156 aaKnown RBP14.31□□□□□ -0.12
ATG4B-225ENST00000494465 ST3GAL2Q16842 350 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 RBMXL3Q8N7X1 1067 aaKnown RBP14.31□□□□□ -0.12
ATG4B-225ENST00000494465 OR8S1Q8NH09 359 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 REPIN1Q9BWE0 567 aaKnown RBP14.31□□□□□ -0.12
ATG4B-225ENST00000494465 BEX1Q9HBH7 125 aa14.31□□□□□ -0.12
ATG4B-225ENST00000494465 BSNQ9UPA5 3926 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 FOXI3A8MTJ6 420 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-225ENST00000494465 ARPC1BO15143 372 aaKnown RBP14.3□□□□□ -0.12
ATG4B-225ENST00000494465 MTCP1P56278 107 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 DPPA2Q7Z7J5 298 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 BEST4Q8NFU0 473 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 OR10K1Q8NGX5 313 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 NUDCD2Q8WVJ2 157 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 MS4A3Q96HJ5 214 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 OR51J1Q9H342 316 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 ZNF107Q9UII5 783 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-225ENST00000494465 WASF3Q9UPY6 502 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 SSX5O60225 188 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 CD74P04233 296 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 IGHV1-2P23083 117 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 KIR2DL2P43627 348 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-225ENST00000494465 MECP2P51608 486 aaKnown RBP14.3□□□□□ -0.12
ATG4B-225ENST00000494465 GK2Q14410 553 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-225ENST00000494465 CNN3Q15417 329 aaKnown RBP14.3□□□□□ -0.12
ATG4B-225ENST00000494465 KCNJ8Q15842 424 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 ACSF3Q4G176 576 aaPredicted RBP14.3□□□□□ -0.12
ATG4B-225ENST00000494465 TCTE3Q8IZS6 198 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 OR51S1Q8NGJ8 323 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 WNT2BQ93097 391 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 SCNM1Q9BWG6 230 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 CST11Q9H112 138 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 NEK6Q9HC98 313 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 DKK4Q9UBT3 224 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 SVILO95425 2214 aa14.3□□□□□ -0.12
ATG4B-225ENST00000494465 ANKRD11Q6UB99 2663 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-225ENST00000494465 NGFP01138 241 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 HPXP02790 462 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 MGMTP16455 207 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 PRKACBP22694 351 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 FCN2Q15485 313 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 ZNF782Q6ZMW2 699 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-225ENST00000494465 TRAPPC6BQ86SZ2 158 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 MDP1Q86V88 176 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 APOBEC3DQ96AK3 386 aaPredicted RBP14.29□□□□□ -0.12
ATG4B-225ENST00000494465 RAB3CQ96E17 227 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 ZNF816-ZNF321PA0A0X1KG74 233 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 FAM230AA0A1W2PPH8 454 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 CYB5AP00167 134 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 ZNF735P0CB33 412 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 HIST1H1DP16402 221 aaKnown RBP14.29□□□□□ -0.12
ATG4B-225ENST00000494465 SERPINA2P20848 420 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 PLP2Q04941 152 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 CBX3Q13185 183 aa14.29□□□□□ -0.12
ATG4B-225ENST00000494465 RBMS2Q15434 407 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms