RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ATMQ13315 3056 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 IGKV1-27A0A075B6S5 117 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 ZNF816-ZNF321PA0A0X1KG74 233 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 ANKRD20A5PA0PJZ0 165 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 FUOMA2VDF0 154 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 C5orf49A4QMS7 147 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 TMEM8BA6NDV4 472 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 A6NIN4 97 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 OR5H1A6NKK0 313 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 C1QTNF9BB2RNN3 333 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 MAGEB3O15480 346 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 AKR7A2O43488 359 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 CA11O75493 328 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 NGFP01138 241 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 IL2RAP01589 272 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 C1QTNF9P0C862 333 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 OCMP0CE72 109 aaPredicted RBP5.85□□□□□ -1.47
MSH5-217ENST00000494458 CD79AP11912 226 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 SPNP16150 400 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 FAHP16930 419 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 NAT1P18440 290 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 PRKACBP22694 351 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 AZGP1P25311 298 aaKnown RBP5.85□□□□□ -1.47
MSH5-217ENST00000494458 KIR2DL3P43628 341 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 FUT6P51993 359 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 RAG2P55895 527 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 TMEM50BP56557 158 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 TAS2R20P59543 309 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 DGCR2P98153 550 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 GPR176Q14439 515 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 FAM189A2Q15884 450 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 ZNF260Q3ZCT1 412 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 TIMM23BQ5SRD1 257 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 C9orf135Q5VTT2 229 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 SEZ6L2Q6UXD5 910 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 CCBE1Q6UXH8 406 aaPredicted RBP5.85□□□□□ -1.47
MSH5-217ENST00000494458 C1QL2Q7Z5L3 287 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 CD163Q86VB7 1156 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 TMEM200AQ86VY9 491 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 SAXO1Q8IYX7 474 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 ZNF101Q8IZC7 436 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 RPRMLQ8N4K4 120 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 CISD2Q8N5K1 135 aaKnown RBP5.85□□□□□ -1.47
MSH5-217ENST00000494458 ZSCAN4Q8NAM6 433 aaPredicted RBP5.85□□□□□ -1.47
MSH5-217ENST00000494458 CSNK2A3Q8NEV1 391 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 SLC30A7Q8NEW0 376 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 DMRTA2Q96SC8 542 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 USB1Q9BQ65 265 aaKnown RBP5.85□□□□□ -1.47
MSH5-217ENST00000494458 MARVELD1Q9BSK0 173 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 SLC22A4Q9H015 551 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 LPAR5Q9H1C0 372 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 PIGMQ9H3S5 423 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 AUNIPQ9H7T9 357 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 PROCRQ9UNN8 238 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 AMDHD2Q9Y303 409 aa5.85□□□□□ -1.47
MSH5-217ENST00000494458 PRRC2CQ9Y520 2896 aaKnown RBP5.85□□□□□ -1.47
MSH5-217ENST00000494458 A0A0A6YYD4 124 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 PQLC2LA1A4F0 135 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 METTL21EPA6NDL7 271 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 PRSS44E7EML9 344 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 PRRG2O14669 202 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 LYRM1O43325 122 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 SSX4O60224 188 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 SMPD2O60906 423 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 LYZL6O75951 148 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 KDM4BO94953 1096 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 ECDO95905 644 aaPredicted RBP5.84□□□□□ -1.47
MSH5-217ENST00000494458 NRASP01111 189 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 ACAA1P09110 424 aaPredicted RBP5.84□□□□□ -1.47
MSH5-217ENST00000494458 FAM87AP0C7U9 286 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 RAC2P15153 192 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 MPZP25189 248 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 APLNRP35414 380 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 PMELP40967 661 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 RBP2P50120 134 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 BCAP31P51572 246 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 MECP2P51608 486 aaKnown RBP5.84□□□□□ -1.47
MSH5-217ENST00000494458 UCP2P55851 309 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 BTG1P62324 171 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 RPS27AP62979 156 aaKnown RBP5.84□□□□□ -1.47
MSH5-217ENST00000494458 CXADRP78310 365 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 KLRB1Q12918 225 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 DAZAP2Q15038 168 aaPredicted RBP5.84□□□□□ -1.47
MSH5-217ENST00000494458 CNN3Q15417 329 aaKnown RBP5.84□□□□□ -1.47
MSH5-217ENST00000494458 CEACAM21Q3KPI0 293 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 TMEM69Q5SWH9 247 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 TRIQKQ629K1 86 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 OLFML2AQ68BL7 652 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 ELP2Q6IA86 826 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 GLIPR1L1Q6UWM5 242 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 UNQ6494/PRO21346Q6UXR6 183 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 LHFPL2Q6ZUX7 228 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 SSX8Q7RTT4 187 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 MRGPRGQ86SM5 289 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 MYPOPQ86VE0 399 aaPredicted RBP5.84□□□□□ -1.47
MSH5-217ENST00000494458 CXorf67Q86X51 503 aaPredicted RBP5.84□□□□□ -1.47
MSH5-217ENST00000494458 CADM3Q8N126 398 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 JAGN1Q8N5M9 183 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 CNEP1R1Q8N9A8 125 aa5.84□□□□□ -1.47
MSH5-217ENST00000494458 TMEM104Q8NE00 496 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms