RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 HPSE2Q8WWQ2 592 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 OR5P3Q8WZ94 311 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 MICU1Q9BPX6 476 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 FN3KRPQ9HA64 309 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 ABCB9Q9NP78 766 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 CLEC2DQ9UHP7 191 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 ENPP5Q9UJA9 477 aa11.4□□□□□ -0.58
COL1A1-208ENST00000494334 CAB39Q9Y376 341 aaPredicted RBP11.4□□□□□ -0.58
COL1A1-208ENST00000494334 CR1P17927 2039 aa11.4□□□□□ -0.59
COL1A1-208ENST00000494334 LOC107986453A0A1B0GWG9 222 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 A6NIN4 97 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 LRRC30A6NM36 301 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 OR4C45A6NMZ5 311 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 DHRS7CA6NNS2 312 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 RRP9O43818 475 aaKnown RBP11.39□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF205O95201 554 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 HEXAP06865 529 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 UBCP0CG48 685 aaKnown RBP11.39□□□□□ -0.59
COL1A1-208ENST00000494334 MYL12AP19105 171 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 C21orf33P30042 268 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-208ENST00000494334 THBS2P35442 1172 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 GTF2A1P52655 376 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-208ENST00000494334 GBX2P52951 348 aaPredicted RBP11.39□□□□□ -0.59
COL1A1-208ENST00000494334 LMO4P61968 165 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 BTG1P62324 171 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 CSNK2BP67870 215 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 MRPL28Q13084 256 aaKnown RBP11.39□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF154Q13106 437 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 FAM76BQ5HYJ3 339 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 DMRTC1Q5HYR2 192 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 CEP78Q5JTW2 689 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 FAM201AQ5SY85 155 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 TMEM244Q5VVB8 128 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 TMEM42Q69YG0 159 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 CYB5R2Q6BCY4 276 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 CSPG4Q6UVK1 2322 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF826PQ6ZT77 177 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 MOB3CQ70IA8 216 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 AHSA2Q719I0 299 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 KLHL36Q8N4N3 616 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 CCDC54Q8NEL0 328 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 OR11L1Q8NGX0 322 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 HPS1Q92902 700 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 RNF170Q96K19 258 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 HIST1H2AAQ96QV6 131 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 RTL8AQ9BWD3 113 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 FKBP14Q9NWM8 211 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 C1orf123Q9NWV4 160 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 CHCHD3Q9NX63 227 aaKnown RBP11.39□□□□□ -0.59
COL1A1-208ENST00000494334 RAB26Q9ULW5 256 aa11.39□□□□□ -0.59
COL1A1-208ENST00000494334 ISPDA4D126 451 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 SLC1A7O00341 560 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 CD5LO43866 347 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 LMX1BO60663 402 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 NRASP01111 189 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 ISG15P05161 165 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 IRF2P14316 349 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 TGM4P49221 684 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 GZMKP49863 264 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 HOXA4Q00056 320 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-208ENST00000494334 MED21Q13503 144 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 ZMYND11Q15326 602 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 CEACAM21Q3KPI0 293 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 CLVS2Q5SYC1 327 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 XAF1Q6GPH4 301 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 TMPRSS11AQ6ZMR5 421 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 LRRC28Q86X40 367 aaPredicted RBP11.38□□□□□ -0.59
COL1A1-208ENST00000494334 C1orf87Q8N0U7 546 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 STX19Q8N4C7 294 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 OR5A2Q8NGI9 324 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 HAVCR2Q8TDQ0 301 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 MSI2Q96DH6 328 aaKnown RBP11.38□□□□□ -0.59
COL1A1-208ENST00000494334 C1orf159Q96HA4 380 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 TLNRD1Q9H1K6 362 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 TMEM165Q9HC07 324 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 GPR173Q9NS66 373 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 BABAM2Q9NXR7 383 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 RNF7Q9UBF6 113 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 DYSFO75923 2080 aa11.38□□□□□ -0.59
COL1A1-208ENST00000494334 PPIAL4EA0A075B759 164 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 A6NLC8 198 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 TMEM210A6NLX4 147 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF732B4DXR9 585 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 FAM157AC9JC47 383 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 PTGES3LE9PB15 166 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 PPIAL4DF5H284 164 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 CDIPTO14735 213 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 PPIAL4FP0DN26 164 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF12P17014 697 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 MDH2P40926 338 aaKnown RBP11.37□□□□□ -0.59
COL1A1-208ENST00000494334 GPM6AP51674 278 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 CDH15P55291 814 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 TMEM155Q4W5P6 130 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 PLCXD3Q63HM9 321 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 KCTD8Q6ZWB6 473 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 GCSAMQ8N6F7 178 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF676Q8N7Q3 588 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 ZNF485Q8NCK3 441 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 OR10AC1Q8NH08 325 aa11.37□□□□□ -0.59
COL1A1-208ENST00000494334 OR52N1Q8NH53 320 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms