RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 FCARP24071 287 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ARRB1P49407 418 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CCR4P51679 360 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CCR6P51684 374 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 KRTAP10-7P60409 375 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ACTC1P68032 377 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ACTA1P68133 377 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ARG2P78540 354 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CDK6Q00534 326 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 HMGCS1Q01581 520 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CSTF1Q05048 431 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 EGR4Q05215 589 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 IL24Q13007 206 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 BTN1A1Q13410 526 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 UNC119Q13432 240 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 VGLL4Q14135 290 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 JOSD1Q15040 202 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 IRF4Q15306 451 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SURF2Q15527 256 aaPredicted RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 HMGN3Q15651 99 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TWIST1Q15672 202 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 CDO1Q16878 200 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMEM52BQ4KMG9 183 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ACTL10Q5JWF8 245 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 GLT8D1Q68CQ7 371 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF880Q6PDB4 577 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZCCHC12Q6PEW1 402 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 DHRS11Q6UWP2 260 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ZNF836Q6ZNA1 936 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ACOT7LQ6ZUV0 252 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TMPRSS12Q86WS5 348 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR4C16Q8NGL9 310 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 TRMT10AQ8TBZ6 339 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 C15orf40Q8WUR7 153 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLAMF9Q96A28 289 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 PPP1R36Q96LQ0 422 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 DGAT2Q96PD7 388 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 SMIM14Q96QK8 99 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 UBQLN3Q9H347 655 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 HES4Q9HCC6 221 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 NUDT15Q9NV35 164 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 MPP6Q9NZW5 540 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 ING4Q9UNL4 249 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 KLHDC2Q9Y2U9 406 aa2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 PTRH2Q9Y3E5 179 aaKnown RBP2.18□□□□□ -2.06
CDC42EP3-205ENST00000494083 A0A0U1RQV5 110 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 GGT3PA6NGU5 568 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 C9J4A7 227 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 HSBP1L1C9JCN9 74 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 ALOX12BO75342 701 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 RP2O75695 350 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 STK16O75716 305 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 DUS4LO95620 317 aaKnown RBP2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 DIRAS3O95661 229 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 C6orf47O95873 294 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 HPRT1P00492 218 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 CTSLP07711 333 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR2T7P0C7T2 308 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 F3P13726 295 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 CRABP1P29762 137 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 LCN1P31025 176 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 HNF1BP35680 557 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 APOBEC1P41238 236 aaKnown RBP2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 NSG1P42857 185 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 LPAR6P43657 344 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 CX3CR1P49238 355 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 STARP49675 285 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR1D5P58170 312 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 MRPS15P82914 257 aaKnown RBP2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 PAX5Q02548 391 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 RPE65Q16518 533 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC25A53Q5H9E4 307 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 MARC1Q5VT66 337 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 CST9Q5W186 159 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 PVRIGQ6DKI7 326 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR4C11Q6IEV9 310 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC39A5Q6ZMH5 540 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 ASB18Q6ZVZ8 466 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC25A26Q70HW3 274 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 RNF144BQ7Z419 303 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 BEST3Q8N1M1 668 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 SVBPQ8N300 66 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 LRRC17Q8N6Y2 441 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 LINC01555Q8NAE3 123 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR1S2Q8NGQ3 325 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR13C3Q8NGS6 347 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR2T27Q8NH04 317 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 OR52I2Q8NH67 350 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 MPLKIPQ8TAP9 179 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 MRPL24Q96A35 216 aaKnown RBP2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 ARRDC3Q96B67 414 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 SLC25A36Q96CQ1 311 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 ADGRG7Q96K78 797 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 LRR1Q96L50 414 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 TEFMQ96QE5 360 aaKnown RBP2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 C20orf144Q9BQM9 153 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 TPPP3Q9BW30 176 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 DPY30Q9C005 99 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 STRADBQ9C0K7 418 aa2.17□□□□□ -2.06
CDC42EP3-205ENST00000494083 LAT2Q9GZY6 243 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms