RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 NICN1Q9BSH3 213 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 CIPCQ9C0C6 399 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 ATG10Q9H0Y0 220 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 RBKSQ9H477 322 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SLC2A4RGQ9NR83 387 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 FBXL17Q9UF56 701 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 MSRAQ9UJ68 235 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 LSM5Q9Y4Y9 91 aaKnown RBP6.13□□□□□ -1.43
VPS13B-205ENST00000493587 SELENOKQ9Y6D0 94 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 UNC80Q8N2C7 3258 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 C5orf42Q9H799 3197 aa6.13□□□□□ -1.43
VPS13B-205ENST00000493587 LOC100289279A0A1B0GTE1 492 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 A0A1W2PRS3 328 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 TLCD2A6NGC4 264 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 HYAL3O43820 417 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-205ENST00000493587 SAP30O75446 220 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 TTRP02766 147 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 GYPBP06028 91 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 GLB1P16278 677 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 FBLP22087 321 aaKnown RBP6.12□□□□□ -1.43
VPS13B-205ENST00000493587 UCP1P25874 307 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 BIDP55957 195 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 HLA-DRB3P79483 266 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 RAB32Q13637 225 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 PGGHGQ32M88 737 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 WBP2NLQ6ICG8 309 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 Q6ZVU0 165 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 ZNF584Q8IVC4 421 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 CYB561D1Q8N8Q1 229 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 LMLNQ96KR4 655 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 SAMD8Q96LT4 415 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 GNRHR2Q96P88 292 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 C20orf144Q9BQM9 153 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 CRISPLD2Q9H0B8 497 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 Q9N2J8 555 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 SIDT1Q9NXL6 827 aaKnown RBP6.12□□□□□ -1.43
VPS13B-205ENST00000493587 NTNG1Q9Y2I2 539 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 LIPGQ9Y5X9 500 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 IGHV2OR16-5A0A0B4J2B6 119 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 CORTO00230 105 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 TAPBPO15533 448 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 P2RX6O15547 441 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 B3GAT3O94766 335 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 CNIH1O95406 144 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 OR4Q2P0C623 313 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 RPL12P30050 165 aaKnown RBP6.12□□□□□ -1.43
VPS13B-205ENST00000493587 CLDN18P56856 261 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 KRTDAPP60985 99 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 CDK3Q00526 305 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 NR0B2Q15466 257 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 PRSS54Q6PEW0 395 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 MBOAT2Q6ZWT7 520 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 GJD3Q8N144 294 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 CYB561A3Q8NBI2 242 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 SNIP1Q8TAD8 396 aaKnown RBP6.12□□□□□ -1.43
VPS13B-205ENST00000493587 ASB11Q8WXH4 323 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 LIN37Q96GY3 246 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-205ENST00000493587 GTSF1LQ9H1H1 148 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 ZDHHC3Q9NYG2 299 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 ST3GAL6Q9Y274 331 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 YBX2Q9Y2T7 364 aaKnown RBP6.12□□□□□ -1.43
VPS13B-205ENST00000493587 A0A087WWC5 75 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 A0A1B0GW15 77 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 ODAMA1E959 279 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 RBFOX3A6NFN3 312 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 H0YIZ8 118 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 HSD17B6O14756 317 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 FGF1P05230 155 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 GCH1P30793 250 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 MAPK8P45983 427 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 CKS1BP61024 79 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 RBPJQ06330 500 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 MESP2Q0VG99 397 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 TMEM241Q24JQ0 296 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 SBSNQ6UWP8 590 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 PRSS57Q6UWY2 283 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 UNQ9370/PRO34162Q6UXP9 181 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 TMEM184AQ6ZMB5 413 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 MEPCEQ7L2J0 689 aaKnown RBP6.12□□□□□ -1.43
VPS13B-205ENST00000493587 PIANPQ8IYJ0 282 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 UMODL1-AS1Q8N2C9 162 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 OR51D1Q8NGF3 324 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 OR2V1Q8NHB1 315 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 SLC35G5Q96KT7 338 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 ATP6V0BQ99437 205 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 ABHD14AQ9BUJ0 271 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 ANGPTL4Q9BY76 406 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 PRR13Q9NZ81 148 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 UQCR10Q9UDW1 63 aa6.12□□□□□ -1.43
VPS13B-205ENST00000493587 SLC16A5O15375 505 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 OR2T7P0C7T2 308 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SELPP16109 830 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 IMPA1P29218 277 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 GNRHRP30968 328 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 PPP2CBP62714 309 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 PPP2CAP67775 309 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 IL24Q13007 206 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 SQSTM1Q13501 440 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 ELOCQ15369 112 aa6.11□□□□□ -1.43
VPS13B-205ENST00000493587 GTF2H5Q6ZYL4 71 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms