RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 ADIPOQQ15848 244 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 TIMM50Q3ZCQ8 353 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 ZMAT1Q5H9K5 638 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 CLEC2AQ6UVW9 174 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 FTMTQ8N4E7 242 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 CSNK2A3Q8NEV1 391 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 THRSPQ92748 146 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 TMEM106AQ96A25 262 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 TAAR3PQ9P1P4 343 aa11.46□□□□□ -0.57
MSH6-208ENST00000493177 ITPR3Q14573 2671 aa11.46□□□□□ -0.58
MSH6-208ENST00000493177 ZNF816-ZNF321PA0A0X1KG74 233 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 TRDV1A0A1B0GX56 115 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 CCDC160A6NGH7 325 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 IQCF6A8MYZ5 107 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 NOL3O60936 208 aaKnown RBP11.45□□□□□ -0.58
MSH6-208ENST00000493177 GPX5O75715 221 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 GATBO75879 557 aaKnown RBP11.45□□□□□ -0.58
MSH6-208ENST00000493177 OCMP0CE72 109 aaPredicted RBP11.45□□□□□ -0.58
MSH6-208ENST00000493177 KITLGP21583 273 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 SERPINF1P36955 418 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 CRYBB2P43320 205 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 LSM3P62310 102 aaKnown RBP11.45□□□□□ -0.58
MSH6-208ENST00000493177 MOGQ16653 247 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 NKPD1Q17RQ9 610 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 C22orf42Q6IC83 251 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 C11orf71Q6IPW1 123 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 TMEM91Q6ZNR0 172 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 MAPK1IP1LQ8NDC0 245 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 PIGCQ92535 297 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 ADAT3Q96EY9 351 aaPredicted RBP11.45□□□□□ -0.58
MSH6-208ENST00000493177 DERL3Q96Q80 235 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 VRK1Q99986 396 aaPredicted RBP11.45□□□□□ -0.58
MSH6-208ENST00000493177 PAPOLGQ9BWT3 736 aaKnown RBP11.45□□□□□ -0.58
MSH6-208ENST00000493177 NOX4Q9NPH5 578 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 MYEF2Q9P2K5 600 aaKnown RBP11.45□□□□□ -0.58
MSH6-208ENST00000493177 GSTK1Q9Y2Q3 226 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 RHBDD3Q9Y3P4 386 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 HIVEP1P15822 2718 aa11.45□□□□□ -0.58
MSH6-208ENST00000493177 TEP1Q99973 2627 aaKnown RBP11.44□□□□□ -0.58
MSH6-208ENST00000493177 PLSCR5A0PG75 271 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 DHRS7CA6NNS2 312 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 IGHV3-13P01766 116 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 ALDH3B1P43353 468 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 HSD17B12Q53GQ0 312 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 TMEM255AQ5JRV8 349 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 CLVS2Q5SYC1 327 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 FAM27D1Q5T7N8 215 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 ZBTB37Q5TC79 503 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 UNQ9370/PRO34162Q6UXP9 181 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 Q6ZSR3 168 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 MOB3CQ70IA8 216 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 ANKRD13BQ86YJ7 626 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 SERPINA12Q8IW75 414 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 OR8G5Q8NG78 346 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 RPL3LQ92901 407 aaKnown RBP11.44□□□□□ -0.58
MSH6-208ENST00000493177 ITFG2Q969R8 447 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 C10orf35Q96D05 121 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 ORAI1Q96D31 301 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 HIST1H2AAQ96QV6 131 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 REG4Q9BYZ8 158 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 NAA50Q9GZZ1 169 aaKnown RBP11.44□□□□□ -0.58
MSH6-208ENST00000493177 GPR173Q9NS66 373 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 TMEM100Q9NV29 134 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 TXNL4BQ9NX01 149 aaKnown RBP11.44□□□□□ -0.58
MSH6-208ENST00000493177 TAS2R4Q9NYW5 299 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 CKLFQ9UBR5 152 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 GPR160Q9UJ42 338 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 CELSR1Q9NYQ6 3014 aa11.44□□□□□ -0.58
MSH6-208ENST00000493177 CR1P17927 2039 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 IGLV3-9A0A075B6K5 115 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 TRBV5-7A0A0A0MS05 114 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 ANKRD61A6NGH8 418 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 ZNF850A8MQ14 1090 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 B9A039 149 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 H7C417 338 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 LILRA1O75019 489 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 ARL6IP5O75915 188 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 NRASP01111 189 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 ERCC1P07992 297 aaPredicted RBP11.43□□□□□ -0.58
MSH6-208ENST00000493177 GALP22466 123 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 CA6P23280 308 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 MYL9P24844 172 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 CALRP27797 417 aaKnown RBP11.43□□□□□ -0.58
MSH6-208ENST00000493177 DSCR9P59020 149 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 PPP3R1P63098 170 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 PRDX4Q13162 271 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 CARTPTQ16568 116 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 CEP78Q5JTW2 689 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 PLCXD3Q63HM9 321 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 CD200R1LQ6Q8B3 271 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 ZDHHC23Q8IYP9 409 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 OR5D14Q8NGL3 314 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 OR13C9Q8NGT0 318 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 PP6455Q8WZ26 134 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 PHYHIPQ92561 330 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 FAM168AQ92567 244 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 DVL3Q92997 716 aaPredicted RBP11.43□□□□□ -0.58
MSH6-208ENST00000493177 SLITRK2Q9H156 845 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 ZCCHC4Q9H5U6 513 aa11.43□□□□□ -0.58
MSH6-208ENST00000493177 MSL2Q9HCI7 577 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms