RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 RBM38Q9H0Z9 239 aaKnown RBP5.9□□□□□ -1.46
TPR-208ENST00000492973 OBP2BQ9NPH6 170 aa5.9□□□□□ -1.46
TPR-208ENST00000492973 B3GNT2Q9NY97 397 aa5.9□□□□□ -1.46
TPR-208ENST00000492973 SLCO1C1Q9NYB5 712 aa5.9□□□□□ -1.46
TPR-208ENST00000492973 NDUFA13Q9P0J0 144 aa5.9□□□□□ -1.46
TPR-208ENST00000492973 MRM2Q9UI43 246 aaKnown RBP5.9□□□□□ -1.46
TPR-208ENST00000492973 AMDHD2Q9Y303 409 aa5.9□□□□□ -1.46
TPR-208ENST00000492973 LHFPL6Q9Y693 200 aa5.9□□□□□ -1.46
TPR-208ENST00000492973 SIRT4Q9Y6E7 314 aaPredicted RBP5.9□□□□□ -1.46
TPR-208ENST00000492973 CEPT1Q9Y6K0 416 aa5.9□□□□□ -1.46
TPR-208ENST00000492973 TEP1Q99973 2627 aaKnown RBP5.9□□□□□ -1.47
TPR-208ENST00000492973 SMIM31A0A1B0GVY4 71 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 A0A1W2PPR1 153 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 A6NNC1 897 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 SULT1C4O75897 302 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 CST2P09228 141 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 MMP7P09237 267 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 SPARCP09486 303 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 TACSTD2P09758 323 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 OR8G3PP0DMU2 310 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 PRF1P14222 555 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 CBR1P16152 277 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 TGFBR2P37173 567 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 PSMB10P40306 273 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 CAPZA2P47755 286 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 RGS6P49758 472 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 ZNF83P51522 516 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 GTF2A1P52655 376 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 GBX2P52951 348 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 UBE2NP61088 152 aaKnown RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 BDH1Q02338 343 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 GPR50Q13585 617 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 SSX1Q16384 188 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 SRSF7Q16629 238 aaKnown RBP eCLIP5.89□□□□□ -1.472e-10■■■■■ 37.7
TPR-208ENST00000492973 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 RSPO1Q2MKA7 263 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 CCDC92Q53HC0 331 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 C1QTNF12Q5T7M4 302 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 LIPNQ5VXI9 398 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 KCTD18Q6PI47 426 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 DEGS2Q6QHC5 323 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 DCXRQ7Z4W1 244 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 MDP1Q86V88 176 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 MYPOPQ86VE0 399 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 ANKRD13BQ86YJ7 626 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 CLVS1Q8IUQ0 354 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 LRRC18Q8N456 261 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 YIPF7Q8N8F6 280 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 GJC3Q8NFK1 279 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 OR10S1Q8NGN2 331 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 OR2AJ1Q8NGZ0 328 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 RNF133Q8WVZ7 376 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 DGCR14Q96DF8 476 aaKnown RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 MUCL1Q96DR8 90 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 SLAMF6Q96DU3 332 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 PELI1Q96FA3 418 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 MRPL48Q96GC5 212 aaKnown RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 C4orf36Q96KX1 117 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 OR8B4Q96RC9 309 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 MYCBPQ99417 103 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 FUNDC2Q9BWH2 189 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 TTTY10Q9BZA0 68 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 NAA50Q9GZZ1 169 aaKnown RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 C1orf198Q9H425 327 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 ELOVL3Q9HB03 270 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 CRNNQ9UBG3 495 aaPredicted RBP5.89□□□□□ -1.47
TPR-208ENST00000492973 CADP27708 2225 aa5.89□□□□□ -1.47
TPR-208ENST00000492973 LRBAP50851 2863 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 IGHV1-18A0A0C4DH31 117 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 CCRL2O00421 344 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 CASKO14936 926 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 RER1O15258 196 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 PLPP2O43688 288 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 ZNF254O75437 659 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 SRSF10O75494 262 aaKnown RBP5.88□□□□□ -1.47
TPR-208ENST00000492973 CTAG2O75638 210 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 RPP14O95059 124 aaKnown RBP5.88□□□□□ -1.47
TPR-208ENST00000492973 FARS2O95363 451 aaKnown RBP5.88□□□□□ -1.47
TPR-208ENST00000492973 PNPP00491 289 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 PLAUP00749 431 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 IGKV3-15P01624 115 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 IGLV1-44P01699 117 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 KRT8P05787 483 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 CECR9P0C854 216 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 CD79AP11912 226 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 CD36P16671 472 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 ZNF32P17041 273 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 CELP19835 753 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 DCTDP32321 178 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 OPRL1P41146 370 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 CRYBB2P43320 205 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 TGM4P49221 684 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 ACTA2P62736 377 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 ACTG2P63267 376 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 AQP6Q13520 282 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 CCDC58Q4VC31 144 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 BEX5Q5H9J7 111 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 NCMAPQ5T1S8 102 aa5.88□□□□□ -1.47
TPR-208ENST00000492973 GPR107Q5VW38 600 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms