RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 GFAPP14136 432 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 TAS2R43P59537 309 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 KLHL40Q2TBA0 621 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 PRR9Q5T870 116 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 MFSD14CQ5VZR4 134 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 NDUFAF7Q7L592 441 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 MRPL21Q7Z2W9 205 aaKnown RBP2.18□□□□□ -2.06
CLK1-213ENST00000492793 VTCN1Q7Z7D3 282 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 ZNF101Q8IZC7 436 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 WDR31Q8NA23 367 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 OR2Z1Q8NG97 314 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 OR1L1Q8NH94 360 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 WDR34Q96EX3 536 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 ALS2CR12Q96Q35 445 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 RHOXF2Q9BQY4 288 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 TMEM175Q9BSA9 504 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 RTBDNQ9BSG5 229 aaPredicted RBP2.18□□□□□ -2.06
CLK1-213ENST00000492793 SFXN3Q9BWM7 321 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 IL22Q9GZX6 179 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 OR2AG1Q9H205 316 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 ZSCAN16Q9H4T2 348 aaPredicted RBP2.18□□□□□ -2.06
CLK1-213ENST00000492793 ZNF442Q9H7R0 627 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 CYP3A43Q9HB55 503 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 ZMAT5Q9UDW3 170 aaKnown RBP2.18□□□□□ -2.06
CLK1-213ENST00000492793 MARCOQ9UEW3 520 aaPredicted RBP2.18□□□□□ -2.06
CLK1-213ENST00000492793 SVILO95425 2214 aa2.18□□□□□ -2.06
CLK1-213ENST00000492793 SPRR5A0A1B0GTR4 108 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 GOLGA6L7A0A1B0GV03 622 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 ZNF98A6NK75 572 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 A8MUU9 505 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 H0YC42 278 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 UPK1BO75841 260 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 CD28P10747 220 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 MSR1P21757 451 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 CMC4P56277 68 aaPredicted RBP2.17□□□□□ -2.06
CLK1-213ENST00000492793 DAOAP59103 153 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 KRTAP13-2Q52LG2 175 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 HSP90AA4PQ58FG1 418 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 TMEM236Q5W0B7 351 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 DEGS2Q6QHC5 323 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 MIR7-3HGQ8N6C7 128 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 C18orf15Q96N68 181 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 IP6K3Q96PC2 410 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 ARMC7Q9H6L4 198 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 PRSS16Q9NQE7 514 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 SIGLEC7Q9Y286 467 aa2.17□□□□□ -2.06
CLK1-213ENST00000492793 COL1A2P08123 1366 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 ZNF99A8MXY4 864 aaPredicted RBP2.16□□□□□ -2.06
CLK1-213ENST00000492793 DFFAO00273 331 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 CNMDO75829 334 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 GCGP01275 180 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 CELP19835 753 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 MTPNP58546 118 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 PPP1CAP62136 330 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 SLC35A1P78382 337 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 PRKCDQ05655 676 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 SPAG1Q07617 926 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 INCA1Q0VD86 236 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 KPRPQ5T749 579 aaPredicted RBP2.16□□□□□ -2.06
CLK1-213ENST00000492793 FAM222AQ5U5X8 452 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 MED27Q6P2C8 311 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 PRSS54Q6PEW0 395 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 CASP12Q6UXS9 341 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 STK40Q8N2I9 435 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 ZNF321PQ8N8H1 164 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 ST20-AS1Q8NBB2 130 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 APCDD1LQ8NCL9 501 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 FBXO36Q8NEA4 188 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 C1orf50Q9BV19 199 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 FRMD8P1Q9BZ68 369 aaPredicted RBP2.16□□□□□ -2.06
CLK1-213ENST00000492793 PEF1Q9UBV8 284 aaKnown RBP2.16□□□□□ -2.06
CLK1-213ENST00000492793 ZNF257Q9Y2Q1 563 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 OR51B2Q9Y5P1 312 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 KPTNQ9Y664 436 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 ENPP4Q9Y6X5 453 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 TMEM131Q92545 1883 aa2.16□□□□□ -2.06
CLK1-213ENST00000492793 AK9Q5TCS8 1911 aa2.15□□□□□ -2.06
CLK1-213ENST00000492793 A0A1W2PRF3 423 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 A0A1W2PRM7 423 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 PRAMEF26H0Y7S4 382 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 PSPHP1O15172 72 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 TTC4O95801 387 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 SLC35G6P0C7Q6 338 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 GDI2P50395 445 aaKnown RBP2.15□□□□□ -2.07
CLK1-213ENST00000492793 ERFP50548 548 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 RBX1P62877 108 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 RPL18AQ02543 176 aaKnown RBP2.15□□□□□ -2.07
CLK1-213ENST00000492793 ADIGQ0VDE8 80 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 BTN1A1Q13410 526 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 STEAP4Q687X5 459 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 SPINT4Q6UDR6 99 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 LINC00523Q86TU6 105 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 CALHM3Q86XJ0 350 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 SPANXA2-OT1Q8N9U9 137 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 OR6K6Q8NGW6 343 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 OR1P1Q8NH06 330 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 BAALCQ8WXS3 180 aa2.15□□□□□ -2.07
CLK1-213ENST00000492793 ZNF707Q96C28 371 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms