RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 CALHM1Q8IU99 346 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 SLC30A8Q8IWU4 369 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 LINC00518Q8N0U6 118 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 SLC39A11Q8N1S5 342 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 MTURNQ8N3F0 131 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 C9orf62Q8N4C0 152 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 Q8N9P0 234 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 NEXN-AS1Q8NBZ9 246 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 SLC37A3Q8NCC5 494 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 NOXO1Q8NFA2 376 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 OR10G2Q8NGC3 310 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 OR4M1Q8NGD0 313 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 OR13C5Q8NGS8 318 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 ZNF431Q8TF32 576 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 TCEAL4Q96EI5 215 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 SGTBQ96EQ0 304 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 CMTM7Q96FZ5 175 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 C10orf90Q96M02 699 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 KCTD7Q96MP8 289 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 CNN2Q99439 309 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 RHNO1Q9BSD3 238 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 DOHHQ9BU89 302 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 BARHL1Q9BZE3 327 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 LAT2Q9GZY6 243 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 MED28Q9H204 178 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 SLC25A19Q9HC21 320 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 MYOZ1Q9NP98 299 aaPredicted RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 EXOSC4Q9NPD3 245 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 ABCC13Q9NSE7 274 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 KLRF1Q9NZS2 232 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 GHRLQ9UBU3 117 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 FBXL3Q9UKT7 428 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 NEU3Q9UQ49 428 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 PSG11Q9UQ72 335 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 SLC6A5Q9Y345 797 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 DHRS7Q9Y394 339 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 PAM16Q9Y3D7 125 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 RPL36Q9Y3U8 105 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 SNX10Q9Y5X0 201 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 MRPS18BQ9Y676 258 aaKnown RBP4.1□□□□□ -1.75
RTN4-215ENST00000491592 SCN8AQ9UQD0 1980 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 TTC3P53804 2025 aa4.1□□□□□ -1.75
RTN4-215ENST00000491592 A0A1W2PR80 420 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR2M5A3KFT3 312 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 OR51F1A6NGY5 319 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 SLC22A20A6NK97 555 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 KRBOX1C9JBD0 128 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 FAM90A26D6RGX4 464 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 E9PAM4 449 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 ATP6V1G2-DDX39BF2Z307 99 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 M0QZK8 103 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 KPNA3O00505 521 aaPredicted RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 WNT9BO14905 357 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 SLC31A1O15431 190 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 HCRTO43612 131 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 PI15O43692 258 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 PRKYO43930 277 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 SRPX2O60687 465 aaPredicted RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 B3GAT3O94766 335 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 GLSO94925 669 aaPredicted RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 GJB5O95377 273 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 NTN1O95631 604 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 ORM1P02763 201 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 GUSBP08236 651 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 SLC2A2P11168 524 aaPredicted RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 BCKDHAP12694 445 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 CBLP22681 906 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 LHCGRP22888 699 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 RPS12P25398 132 aaKnown RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 FGF9P31371 208 aaPredicted RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 MNDAP41218 407 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 EVX1P49640 407 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 PRLHRP49683 370 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 SGSHP51688 502 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 PRKXP51817 358 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 CRISP1P54107 249 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 AP1S1P61966 158 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 LSM6P62312 80 aaKnown RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 SELENOWP63302 87 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 NTHL1P78549 312 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 TNFRSF9Q07011 255 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 ILF3Q12906 894 aaKnown RBP eCLIP4.09□□□□□ -1.75
RTN4-215ENST00000491592 ZNF77Q15935 545 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 UPP1Q16831 310 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 ATP6V1FQ16864 119 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 TMEM176BQ3YBM2 270 aaPredicted RBP4.09□□□□□ -1.75
RTN4-215ENST00000491592 SLC25A30Q5SVS4 291 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 FRMPD2BQ6IN97 320 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 PAQR6Q6TCH4 344 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 ZNF730Q6ZMV8 503 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.09□□□□□ -1.75
RTN4-215ENST00000491592 DPPA2Q7Z7J5 298 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 GALNT10Q86SR1 603 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 C17orf64Q86WR6 236 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 BBS7Q8IWZ6 715 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 SLC35F2Q8IXU6 374 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 PRSS58Q8IYP2 241 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 SLC34A3Q8N130 599 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 FBXL14Q8N1E6 418 aa4.09□□□□□ -1.75
RTN4-215ENST00000491592 BEST3Q8N1M1 668 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms