RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 KCNMB1Q16558 191 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TMEM128Q5BJH2 165 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 C10orf128Q5T292 105 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 WDSUB1Q8N9V3 476 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ZNRF4Q8WWF5 429 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 HAS2Q92819 552 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TMEM54Q969K7 222 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ARL11Q969Q4 196 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ALX4Q9H161 411 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 LSM5Q9Y4Y9 91 aaKnown RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 CLDN16Q9Y5I7 305 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TDRD6O60522 2096 aaKnown RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 DOCK8Q8NF50 2099 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 C19orf67A6NJJ6 358 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 CELA2AP08217 269 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 HOXB5P09067 269 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF16P17020 682 aaPredicted RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 LGI3Q8N145 548 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 MUCL1Q96DR8 90 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 SEH1LQ96EE3 360 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 GSX2Q9BZM3 304 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 GPR35Q9HC97 309 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 OR2S2Q9NQN1 319 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF891A8MT65 544 aaPredicted RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 GMDSO60547 372 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 PNPP00491 289 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 IFNA5P01569 189 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 SERPINE2P07093 398 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 PTHLHP12272 177 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 OR3A4PP47883 348 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 DEFA5Q01523 94 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 CAMK2BQ13554 666 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 POC1BQ8TC44 478 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 RRNAD1Q96FB5 475 aaKnown RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 SEC22AQ96IW7 307 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 UCN2Q96RP3 112 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 NKX3-1Q99801 234 aaPredicted RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 CHST5Q9GZS9 411 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 SLC25A31Q9H0C2 315 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 MRPS18CQ9Y3D5 142 aaKnown RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 A0A096LPE4 126 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 A0A1W2PPZ6 126 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 RFPL4AA6NLU0 287 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 RFPL4AL1F8VTS6 287 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 IRF2P14316 349 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 RFC3P40938 356 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 STK11Q15831 433 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 PABPC1L2AQ5JQF8 200 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 ACOT7LQ6ZUV0 252 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 ST7LQ8TDW4 575 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF2Q9BSG1 426 aaPredicted RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 OR2H1Q9GZK4 316 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 ACKR4Q9NPB9 350 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 PTPRSQ13332 1948 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 OR5H14A6NHG9 310 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 TERTO14746 1132 aaKnown RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 TNFSF4P23510 183 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 EIF2S3P41091 472 aaKnown RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 SURF2Q15527 256 aaPredicted RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF585AQ6P3V2 769 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 PPP1R32Q7Z5V6 425 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 FAM185AQ8N0U4 392 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 OR4D6Q8NGJ1 314 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 ADAT3Q96EY9 351 aaPredicted RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF385AQ96PM9 386 aaKnown RBP6.48□□□□□ -1.37
NPHP3-208ENST00000490993 OR51B6Q9H340 312 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 LHFPL6Q9Y693 200 aa6.48□□□□□ -1.37
NPHP3-208ENST00000490993 LRRK1Q38SD2 2015 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 DHRS7CA6NNS2 312 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 HMSDA8MTL9 139 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 MST1P26927 711 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 PTGS2P35354 604 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 RAB1AP62820 205 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 RIPPLY2Q5TAB7 128 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 ZBTB37Q5TC79 503 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF687Q8N1G0 1237 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 MARCH1Q8TCQ1 289 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 ARHGAP5-AS1Q96IT6 56 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 GHITMQ9H3K2 345 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 ST3GAL6Q9Y274 331 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 MRPS18BQ9Y676 258 aaKnown RBP6.47□□□□□ -1.37
NPHP3-208ENST00000490993 K7EPK0 472 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 TAAR5O14804 337 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 VSIG8P0DPA2 414 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 PSMB6P28072 239 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 CD96P40200 585 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 SLC22A25Q6T423 547 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 TEX261Q6UWH6 196 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 LSRQ86X29 649 aaPredicted RBP6.47□□□□□ -1.37
NPHP3-208ENST00000490993 FAM71E2Q8N5Q1 922 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF680Q8NEM1 530 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 OR4S1Q8NGB4 309 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 SCGB1C1Q8TD33 95 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 RGP1Q92546 391 aaPredicted RBP6.47□□□□□ -1.37
NPHP3-208ENST00000490993 TRIB1Q96RU8 372 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 PLSCR3Q9NRY6 295 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 KIF25Q9UIL4 384 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 GPR160Q9UJ42 338 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 U3KQ87 197 aa6.47□□□□□ -1.37
NPHP3-208ENST00000490993 DENND4AQ7Z401 1863 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms