RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 KIF25Q9UIL4 384 aa12.73□□□□□ -0.37
ARHGEF39-205ENST00000490638 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 F5H5P2 479 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 ARPC5O15511 151 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 FUT5Q11128 374 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 P2RY6Q15077 328 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 DCUN1D4Q92564 292 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 UBTD1Q9HAC8 227 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 RDH8Q9NYR8 311 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 DOCK7Q96N67 2140 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 PHF1O43189 567 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 ZNF92Q03936 586 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 MGAT2Q10469 447 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 DBPQ10586 325 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 KISS1Q15726 138 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 INO80CQ6PI98 192 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 SIAH3Q8IW03 269 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 GABRG1Q8N1C3 465 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 PSD2Q9BQI7 771 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 AIFM2Q9BRQ8 373 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 COL4A6Q14031 1691 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 MEX3AA1L020 520 aaKnown RBP12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 SDCBPO00560 298 aaPredicted RBP12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 RECKO95980 971 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 SMIM18P0DKX4 95 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 TAS2R20P59543 309 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 RPP30P78346 268 aaKnown RBP12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 NRARPQ7Z6K4 114 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 TCTEX1D2Q8WW35 142 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 SIGLEC12Q96PQ1 595 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 PLEKHF2Q9H8W4 249 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 TMEM38BQ9NVV0 291 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 SLC17A2O00624 439 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 ZNF616Q08AN1 781 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 KHDC1LQ5JSQ8 128 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 MAFIPQ8WZ33 124 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 SLAMF9Q96A28 289 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 MS4A5Q9H3V2 200 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 PPP1R3CQ9UQK1 317 aa12.72□□□□□ -0.37
ARHGEF39-205ENST00000490638 PRSS23O95084 383 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 CST2P09228 141 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 ELK1P19419 428 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 TSC22D1Q15714 1073 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 GPR157Q5UAW9 335 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 C12orf4Q9NQ89 552 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 KCNE5Q9UJ90 142 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 DOCK4Q8N1I0 1966 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 ZNF407Q9C0G0 2248 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 CCR9P51686 369 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 PDCD1Q15116 288 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 ZNF239Q16600 458 aaKnown RBP12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 MRGPRGQ86SM5 289 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 Q8IYB0 196 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR2AK2Q8NG84 335 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR52I2Q8NH67 350 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 OR4A16Q8NH70 328 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 WNT2BQ93097 391 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 UPRTQ96BW1 309 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 IMMP1LQ96LU5 166 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 GPA33Q99795 319 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 RIMS4Q9H426 269 aaPredicted RBP12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 FLVCR1Q9Y5Y0 555 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 A3GALT2U3KPV4 340 aa12.71□□□□□ -0.37
ARHGEF39-205ENST00000490638 WDR81Q562E7 1941 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 IGKV3D-11A0A0A0MRZ8 115 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 TRGV10A0A0A0MS01 117 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 MAGEB1P43366 347 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 ACSM1Q08AH1 577 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 FAM76BQ5HYJ3 339 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 FHL5Q5TD97 284 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 OR6S1Q8NH40 331 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 TMEM171Q8WVE6 324 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 SEH1LQ96EE3 360 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 PIK3IP1Q96FE7 263 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 PLEKHA3Q9HB20 300 aa12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 RBFOX1Q9NWB1 397 aaKnown RBP12.71□□□□□ -0.38
ARHGEF39-205ENST00000490638 FUT3P21217 361 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 LYPD8Q6UX82 237 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 PLPPR2Q96GM1 343 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 SLC25A21Q9BQT8 299 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 OPN3Q9H1Y3 402 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 TINAGQ9UJW2 476 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 MAB21L2Q9Y586 359 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 TRIM64BA6NI03 449 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 GABARAPH6UMI1 98 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 TATDN3Q17R31 274 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 CMTM4Q8IZR5 234 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 LRRC29Q8WV35 223 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 SCPEP1Q9HB40 452 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 HEYLQ9NQ87 328 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 OTOGLQ3ZCN5 2332 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 AKR7A2O43488 359 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 DXOO77932 396 aaKnown RBP12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 EPXP11678 715 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 TGFBR1P36897 503 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 PRSS27Q9BQR3 290 aa12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 MYOZ1Q9NP98 299 aaPredicted RBP12.7□□□□□ -0.38
ARHGEF39-205ENST00000490638 A0A1B0GV50 99 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms