RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 ZNF92Q03936 586 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 HNRNPA0Q13151 305 aaKnown RBP8.67□□□□□ -1.02
TTC28-207ENST00000490475 ZNF404Q494X3 552 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 PRR31Q5SQ13 230 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 GLYATL3Q5SZD4 288 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 LCN1P1Q5VSP4 162 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 CD276Q5ZPR3 534 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 DRAM2Q6UX65 266 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 DCDC5Q6ZRR9 648 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 PGAP1Q75T13 922 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.67□□□□□ -1.02
TTC28-207ENST00000490475 DHRSXQ8N5I4 330 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 BHLHE23Q8NDY6 225 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 OR10AD1Q8NGE0 317 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 OR8J1Q8NGP2 316 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 OR2AE1Q8NHA4 323 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 Q8TCH9 128 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 SPRYD4Q8WW59 207 aaPredicted RBP8.67□□□□□ -1.02
TTC28-207ENST00000490475 C22orf15Q8WYQ4 148 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 SGK3Q96BR1 496 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 UPRTQ96BW1 309 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 HRASLS5Q96KN8 279 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 TTTY10Q9BZA0 68 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 TMEM165Q9HC07 324 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 DCAF16Q9NXF7 216 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 ZNF319Q9P2F9 582 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 CLN8Q9UBY8 286 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 ZNF69Q9UC07 566 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 COPS3Q9UNS2 423 aa8.67□□□□□ -1.02
TTC28-207ENST00000490475 KIR2DS1A0A191URI9 304 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 DNAJC9-AS1A6NH13 148 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 SLC22A31A6NKX4 558 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 H0YL77 283 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 DLGAP1O14490 977 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 TBX1O43435 398 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 ENSAO43768 121 aaKnown RBP8.66□□□□□ -1.02
TTC28-207ENST00000490475 NOL3O60936 208 aaKnown RBP8.66□□□□□ -1.02
TTC28-207ENST00000490475 ENTPD6O75354 484 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 APOL3O95236 402 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 ANXA2P07355 339 aaKnown RBP8.66□□□□□ -1.02
TTC28-207ENST00000490475 CD200P41217 278 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 PITPNBP48739 271 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 ZNF121P58317 390 aaPredicted RBP8.66□□□□□ -1.02
TTC28-207ENST00000490475 ZNF829Q3KNS6 432 aaPredicted RBP8.66□□□□□ -1.02
TTC28-207ENST00000490475 RBM48Q5RL73 367 aaKnown RBP8.66□□□□□ -1.02
TTC28-207ENST00000490475 GPR157Q5UAW9 335 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 FAM57BQ71RH2 274 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 RHOUQ7L0Q8 258 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 PRSS45Q7RTY3 260 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 MRPL21Q7Z2W9 205 aaKnown RBP8.66□□□□□ -1.02
TTC28-207ENST00000490475 MOGAT3Q86VF5 341 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 GID4Q8IVV7 300 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 SLC35F2Q8IXU6 374 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 OR51G2Q8NGK0 314 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 TRUB1Q8WWH5 349 aaKnown RBP8.66□□□□□ -1.02
TTC28-207ENST00000490475 BORCS5Q969J3 196 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 CNN2Q99439 309 aaKnown RBP8.66□□□□□ -1.02
TTC28-207ENST00000490475 TMEM246Q9BRR3 403 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 SLITRK2Q9H156 845 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 SP140LQ9H930 580 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 FN3KRPQ9HA64 309 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 ADGRL4Q9HBW9 690 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 FAM118AQ9NWS6 357 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 IMPAD1Q9NX62 359 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 ERVK-18Q9QC07 812 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 GMPPBQ9Y5P6 360 aa8.66□□□□□ -1.02
TTC28-207ENST00000490475 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 IGHV3-64DA0A0J9YX35 117 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 LOC100130705A0A1B0GUX0 176 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 F5H5P2 479 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 MLNRO43193 412 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 MRPS14O60783 128 aaKnown RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 PFDN1O60925 122 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 CYB5R3P00387 301 aaPredicted RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 PLATP00750 562 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 APOC1P02654 83 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 HLA-DPB1P04440 258 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 HTR1FP30939 366 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 CD80P33681 288 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 DDOSTP39656 456 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 GABARAPL2P60520 117 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 CXCR4P61073 352 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 RPL15P61313 204 aaKnown RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 SEC61A1P61619 476 aaKnown RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 SNRPGP62308 76 aaKnown RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 PAX2Q02962 417 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 IL18R1Q13478 541 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 OR8G1Q15617 311 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 GFOD2Q3B7J2 385 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 KLF17Q5JT82 389 aaPredicted RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 TTC23Q5W5X9 447 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 C16orf87Q6PH81 154 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 KRT77Q7Z794 578 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 PPP1R14AQ96A00 147 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 ISOC1Q96CN7 298 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 TBX5Q99593 518 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 APOL4Q9BPW4 351 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 NUDT16L1Q9BRJ7 211 aaKnown RBP8.65□□□□□ -1.02
TTC28-207ENST00000490475 NOX4Q9NPH5 578 aa8.65□□□□□ -1.02
TTC28-207ENST00000490475 CLN6Q9NWW5 311 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms