RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 C4orf33Q8N1A6 199 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 OR1M1Q8NGA1 313 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 GPR32P1Q8NGA4 272 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 OR11H6Q8NGC7 330 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 OR8U1Q8NH10 309 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 BCAS4Q8TDM0 211 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 RNFT2Q96EX2 444 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 MED30Q96HR3 178 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 AKR1E2Q96JD6 320 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 NOL4LQ96MY1 436 aaPredicted RBP5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 AIG1Q9NVV5 245 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 C14orf119Q9NWQ9 140 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 ZNF222Q9UK12 451 aa5.55□□□□□ -1.52
PDLIM1-203ENST00000490391 IGKV1D-17A0A075B6S4 117 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 BHLHE40O14503 412 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 CDIPTO14735 213 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 OR2F2O95006 317 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 IGHV1-8P0DP01 117 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 IGHV4-30-4P0DP06 118 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 GP9P14770 177 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 SPNP16150 400 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 ZNF823P16415 610 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 LBPP18428 481 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 KRT4P19013 534 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 CD24P25063 80 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 CNTFRP26992 372 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 AQP1P29972 269 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 GRK5P34947 590 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 SRSF3P84103 164 aaKnown RBP5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 CDK6Q00534 326 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 SLC34A1Q06495 639 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 MALLQ13021 153 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 ZNF273Q14593 569 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 KIR2DS1Q14954 304 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 FAM27D1Q5T7N8 215 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 TMEM200BQ69YZ2 307 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 C8orf74Q6P047 294 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 PLBD1Q6P4A8 553 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 SLC2A7Q6PXP3 512 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 MRPL21Q7Z2W9 205 aaKnown RBP5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 Q8N1Y9 231 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 ZNF781Q8N8C0 355 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 SMYD1Q8NB12 490 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 ZNRF1Q8ND25 227 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 OR56B2PQ8NGI1 322 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 OR2AE1Q8NHA4 323 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 SGTBQ96EQ0 304 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 SLC25A33Q9BSK2 321 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 PAIP1Q9H074 479 aaKnown RBP5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 DCLRE1BQ9H816 532 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 KIAA1456Q9P272 454 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 HILPDAQ9Y5L2 63 aa5.54□□□□□ -1.52
PDLIM1-203ENST00000490391 HMCN2Q8NDA2 5059 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 A6NIZ1 184 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 C17orf98A8MV24 154 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 F5H5K5 113 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 CLIC1O00299 241 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 IMPA2O14732 288 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 ITM2AO43736 263 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 ANP32DO95626 131 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 LCATP04180 440 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 IFNA6P05013 189 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 SDHAP31040 664 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 NAA10P41227 235 aaPredicted RBP5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 CTXN1P60606 82 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 GMFBP60983 142 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 RAP1BP61224 184 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 RAP1AP62834 184 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 RPL31P62899 125 aaKnown RBP5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 MZT1Q08AG7 82 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 HAGHQ16775 308 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 SNAI3Q3KNW1 292 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 MESTQ5EB52 335 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 GCNT6Q5T4J0 391 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 CORO6Q6QEF8 472 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 DPY19L4Q7Z388 723 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 NKAIN4Q8IVV8 208 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 MSRB3Q8IXL7 192 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 FAM71E2Q8N5Q1 922 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 DPP10Q8N608 796 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 TMEM185AQ8NFB2 350 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 GJC3Q8NFK1 279 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 OR10Z1Q8NGY1 313 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 TMEM255BQ8WV15 326 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 GTF2H4Q92759 462 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 SDSLQ96GA7 329 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 RBM14Q96PK6 669 aaKnown RBP5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 NABP2Q9BQ15 211 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 PNRC2Q9NPJ4 139 aaKnown RBP5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 SLC25A37Q9NYZ2 338 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 USE1Q9NZ43 259 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 KCNG2Q9UJ96 466 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 RPS6KA6Q9UK32 745 aa5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 COA3Q9Y2R0 106 aaPredicted RBP5.53□□□□□ -1.52
PDLIM1-203ENST00000490391 VPS13BQ7Z7G8 4022 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 A0A1B0GVY2 172 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 PRSS37A4D1T9 235 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 GGT3PA6NGU5 568 aa5.52□□□□□ -1.53
PDLIM1-203ENST00000490391 OR2AT4A6NND4 320 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms