RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 MED27Q6P2C8 311 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 ULK3Q6PHR2 472 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 NDUFAF7Q7L592 441 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 CALHM3Q86XJ0 350 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 STK40Q8N2I9 435 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 PROKR2Q8NFJ6 384 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 RXFP2Q8WXD0 754 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 ISG20Q96AZ6 181 aaKnown RBP2.01□□□□□ -2.09
CD46-216ENST00000490278 TMEM159Q96B96 161 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 CERS2Q96G23 380 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 FAM19A4Q96LR4 140 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 C1orf50Q9BV19 199 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 BLZF1Q9H2G9 400 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 PLEKHF2Q9H8W4 249 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 CHRAC1Q9NRG0 131 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 DDX18Q9NVP1 670 aaKnown RBP2.01□□□□□ -2.09
CD46-216ENST00000490278 TAS2R5Q9NYW4 299 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 DHCR7Q9UBM7 475 aaKnown RBP2.01□□□□□ -2.09
CD46-216ENST00000490278 CES1P1Q9UKY3 287 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 SIGLEC7Q9Y286 467 aa2.01□□□□□ -2.09
CD46-216ENST00000490278 A0A0B4J2E0 115 aa2□□□□□ -2.09
CD46-216ENST00000490278 ISPDA4D126 451 aa2□□□□□ -2.09
CD46-216ENST00000490278 ZNF233A6NK53 670 aa2□□□□□ -2.09
CD46-216ENST00000490278 C16orf90A8MZG2 172 aa2□□□□□ -2.09
CD46-216ENST00000490278 HACD1B0YJ81 288 aa2□□□□□ -2.09
CD46-216ENST00000490278 LINC01619G3V211 115 aa2□□□□□ -2.09
CD46-216ENST00000490278 H3BN98 237 aa2□□□□□ -2.09
CD46-216ENST00000490278 OR7C2O60412 319 aa2□□□□□ -2.09
CD46-216ENST00000490278 UPK1BO75841 260 aa2□□□□□ -2.09
CD46-216ENST00000490278 PMCHP20382 165 aa2□□□□□ -2.09
CD46-216ENST00000490278 CXCR1P25024 350 aa2□□□□□ -2.09
CD46-216ENST00000490278 CCT6AP40227 531 aaKnown RBP2□□□□□ -2.09
CD46-216ENST00000490278 IDH2P48735 452 aaKnown RBP2□□□□□ -2.09
CD46-216ENST00000490278 ERFP50548 548 aa2□□□□□ -2.09
CD46-216ENST00000490278 RBX1P62877 108 aa2□□□□□ -2.09
CD46-216ENST00000490278 RPL18AQ02543 176 aaKnown RBP2□□□□□ -2.09
CD46-216ENST00000490278 INCA1Q0VD86 236 aa2□□□□□ -2.09
CD46-216ENST00000490278 TSC22D1Q15714 1073 aa2□□□□□ -2.09
CD46-216ENST00000490278 KLHL40Q2TBA0 621 aa2□□□□□ -2.09
CD46-216ENST00000490278 MLIPQ5VWP3 458 aa2□□□□□ -2.09
CD46-216ENST00000490278 STEAP4Q687X5 459 aa2□□□□□ -2.09
CD46-216ENST00000490278 KDM4DQ6B0I6 523 aa2□□□□□ -2.09
CD46-216ENST00000490278 C16orf47Q6ZP98 133 aaPredicted RBP2□□□□□ -2.09
CD46-216ENST00000490278 LINC00336Q6ZUF6 198 aa2□□□□□ -2.09
CD46-216ENST00000490278 MRPL21Q7Z2W9 205 aaKnown RBP2□□□□□ -2.09
CD46-216ENST00000490278 SLC25A29Q8N8R3 303 aa2□□□□□ -2.09
CD46-216ENST00000490278 LINC00304Q8N9R0 145 aa2□□□□□ -2.09
CD46-216ENST00000490278 OR4M2Q8NGB6 313 aa2□□□□□ -2.09
CD46-216ENST00000490278 OR5M1Q8NGP8 315 aa2□□□□□ -2.09
CD46-216ENST00000490278 OR1S1Q8NH92 325 aa2□□□□□ -2.09
CD46-216ENST00000490278 PIH1D2Q8WWB5 315 aa2□□□□□ -2.09
CD46-216ENST00000490278 UBE2E2Q96LR5 201 aa2□□□□□ -2.09
CD46-216ENST00000490278 ANP32EQ9BTT0 268 aa2□□□□□ -2.09
CD46-216ENST00000490278 HEBP1Q9NRV9 189 aa2□□□□□ -2.09
CD46-216ENST00000490278 PEF1Q9UBV8 284 aaKnown RBP2□□□□□ -2.09
CD46-216ENST00000490278 NDRG2Q9UN36 371 aaKnown RBP2□□□□□ -2.09
CD46-216ENST00000490278 RHBDD3Q9Y3P4 386 aa2□□□□□ -2.09
CD46-216ENST00000490278 OR51B2Q9Y5P1 312 aa2□□□□□ -2.09
CD46-216ENST00000490278 ADGRL1O94910 1474 aa2□□□□□ -2.09
CD46-216ENST00000490278 PLEKHG2Q9H7P9 1386 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 CCL15-CCL14A0A0B4J2E2 113 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 GOLGA6L7A0A1B0GV03 622 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 A8MWL6 223 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 PRAMEF26H0Y7S4 382 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 MFNGO00587 321 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 MYL12BO14950 172 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 LCA5LO95447 670 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 TTC4O95801 387 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 CD28P10747 220 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 NELFEP18615 380 aaKnown RBP1.99□□□□□ -2.09
CD46-216ENST00000490278 TUBG1P23258 451 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 GABRR2P28476 465 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 DAOAP59103 153 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 PPP1CAP62136 330 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 ELF3P78545 371 aaPredicted RBP1.99□□□□□ -2.09
CD46-216ENST00000490278 LCN2P80188 198 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 FLI1Q01543 452 aaPredicted RBP1.99□□□□□ -2.09
CD46-216ENST00000490278 BTN1A1Q13410 526 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 CCL15Q16663 113 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 DAW1Q8N136 415 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 ORMDL3Q8N138 153 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 WDR31Q8NA23 367 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 TMEM104Q8NE00 496 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 OR1P1Q8NH06 330 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 SFXN5Q8TD22 340 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 S100PBPQ96BU1 408 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 SMARCD1Q96GM5 515 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 SNF8Q96H20 258 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 ALS2CR12Q96Q35 445 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 TMEM175Q9BSA9 504 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 IL22Q9GZX6 179 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 DHX35Q9H5Z1 703 aaKnown RBP1.99□□□□□ -2.09
CD46-216ENST00000490278 LINC00574Q9H8X3 128 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 DYRK4Q9NR20 520 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 TUBG2Q9NRH3 451 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 IL37Q9NZH6 218 aa1.99□□□□□ -2.09
CD46-216ENST00000490278 ARPC4-TTLL3A0A0A6YYG9 625 aa1.98□□□□□ -2.09
CD46-216ENST00000490278 TRDMT1O14717 391 aaKnown RBP1.98□□□□□ -2.09
CD46-216ENST00000490278 CCDC22O60826 627 aa1.98□□□□□ -2.09
CD46-216ENST00000490278 MAS1P04201 325 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms