RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	CLDN23	Q96B33	292 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	RRNAD1	Q96FB5	475 aa	Known RBP	13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	PILRB	Q9UKJ0	227 aa		13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.79	□□□□□ -0.2
BRD9-208	ENST00000489816	SFTPB	P07988	381 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	PRKACB	P22694	351 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	ENDOG	Q14249	297 aa	Known RBP	13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	BVES	Q8NE79	360 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	CRLF2	Q9HC73	371 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	MSGN1	A6NI15	193 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816		D6RAR5	112 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816		M0R135	149 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	COX6A1	P12074	109 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	SLC25A53	Q5H9E4	307 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	ZNF774	Q6NX45	483 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	OR2W3	Q7Z3T1	314 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	OR51F2	Q8NH61	342 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	PTX4	Q96A99	478 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	ZNF799	Q96GE5	643 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	ASF1B	Q9NVP2	202 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	HDGFL3	Q9Y3E1	203 aa		13.78	□□□□□ -0.2
BRD9-208	ENST00000489816	NPIPB13	A6NJU9	1138 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	NPIPB4	C9JG80	1138 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	DHH	O43323	396 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	DKK1	O94907	266 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	MELTF	P08582	738 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	ACKR3	P25106	362 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	SSR4	P51571	173 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	S100A10	P60903	97 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	TRIM61	Q5EBN2	209 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	CLEC18B	Q6UXF7	455 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	DOK3	Q7L591	496 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	FADS6	Q8N9I5	356 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	OR9K2	Q8NGE7	335 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	OR14L1P	Q8NHC6	308 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	TMEM230	Q96A57	120 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	DOCK10	Q96BY6	2186 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816	MED13	Q9UHV7	2174 aa		13.77	□□□□□ -0.2
BRD9-208	ENST00000489816		H0YIZ8	118 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	CD63	P08962	238 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	AGTR1	P30556	359 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	EIF1	P41567	113 aa	Known RBP	13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	SRY	Q05066	204 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	ANKRD55	Q3KP44	614 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	PMS2CL	Q68D20	193 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	ZNF529	Q6P280	563 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	CLEC9A	Q6UXN8	241 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	PNLDC1	Q8NA58	520 aa	Known RBP	13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	OR13G1	Q8NGZ3	307 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	PAQR8	Q8TEZ7	354 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	TMED6	Q8WW62	240 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	ADAT1	Q9BUB4	502 aa	Known RBP	13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	TMEM231	Q9H6L2	316 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	LAMA5	O15230	3695 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816		C9J4A7	227 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	HP	P00738	406 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	LCAT	P04180	440 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	MTCP1	P56278	107 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	HOGA1	Q86XE5	327 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	KCNRG	Q8N5I3	272 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	AGBL5	Q8NDL9	886 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	GJC3	Q8NFK1	279 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	URM1	Q9BTM9	101 aa	Known RBP	13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	NELFA	Q9H3P2	528 aa		13.77	□□□□□ -0.21
BRD9-208	ENST00000489816	CD8A	P01732	235 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	HPN	P05981	417 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	LIF	P15018	202 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	ZP3	P21754	424 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	CCNO	P22674	350 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	HGFAC	Q04756	655 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	IKZF1	Q13422	519 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	WIPI1	Q5MNZ9	446 aa	Predicted RBP	13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	OPN5	Q6U736	354 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	DRAM2	Q6UX65	266 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	PGAP1	Q75T13	922 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	MRPS24	Q96EL2	167 aa	Known RBP	13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	OR10C1	Q96KK4	312 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	IMMP1L	Q96LU5	166 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	FAAP24	Q9BTP7	215 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	OR5AC2	Q9NZP5	309 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	MCTS1	Q9ULC4	181 aa	Known RBP	13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	CCDC187	A0A096LP49	1063 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	ETV2	O00321	342 aa	Predicted RBP	13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	CXCL13	O43927	109 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	PSMB6	P28072	239 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	H3F3A	P84243	136 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	FGL1	Q08830	312 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	CRIP3	Q6Q6R5	217 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	ACOT7L	Q6ZUV0	252 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	C5orf24	Q7Z6I8	188 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	ZIC4	Q8N9L1	334 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	OR1S2	Q8NGQ3	325 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	RNF138	Q8WVD3	245 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	CDX2	Q99626	313 aa	Predicted RBP	13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	PLEKHJ1	Q9NW61	149 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	SLC39A1	Q9NY26	324 aa		13.76	□□□□□ -0.21
BRD9-208	ENST00000489816	DUS4L	O95620	317 aa	Known RBP	13.75	□□□□□ -0.21
BRD9-208	ENST00000489816	CHRM2	P08172	466 aa		13.75	□□□□□ -0.21
BRD9-208	ENST00000489816	SP6	Q3SY56	376 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms