RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 GLRXP35754 106 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 ZNF93P35789 620 aaPredicted RBP12.15□□□□□ -0.46
VPS26A-205ENST00000489656 RPS23P62266 143 aaKnown RBP12.15□□□□□ -0.46
VPS26A-205ENST00000489656 CDSNQ15517 529 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 ZNF718Q3SXZ3 478 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 CRIP3Q6Q6R5 217 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 WFDC8Q8IUA0 241 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 JAGN1Q8N5M9 183 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 NUP37Q8NFH4 326 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 ZNF671Q8TAW3 534 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 LGALS14Q8TCE9 139 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 KLF14Q8TD94 323 aaPredicted RBP12.15□□□□□ -0.46
VPS26A-205ENST00000489656 ITLN2Q8WWU7 325 aaPredicted RBP12.15□□□□□ -0.46
VPS26A-205ENST00000489656 CMBLQ96DG6 245 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 WDR12Q9GZL7 423 aaKnown RBP12.15□□□□□ -0.46
VPS26A-205ENST00000489656 LIN7BQ9HAP6 207 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 HMG20AQ9NP66 347 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 GPR173Q9NS66 373 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 MRPL15Q9P015 296 aaKnown RBP12.15□□□□□ -0.46
VPS26A-205ENST00000489656 CGGBP1Q9UFW8 167 aaPredicted RBP12.15□□□□□ -0.46
VPS26A-205ENST00000489656 NDRG3Q9UGV2 375 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 MPC1Q9Y5U8 109 aa12.15□□□□□ -0.46
VPS26A-205ENST00000489656 ANKHD1Q8IWZ3 2542 aaKnown RBP12.15□□□□□ -0.46
VPS26A-205ENST00000489656 CHD3Q12873 2000 aaKnown RBP12.15□□□□□ -0.47
VPS26A-205ENST00000489656 ANKRD30BLA7E2S9 258 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 HPGDSO60760 199 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 CLDN14O95500 239 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 PAHP00439 452 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 APOA1P02647 267 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 PRB1P04280 392 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 HCKP08631 526 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
VPS26A-205ENST00000489656 ALDH3B1P43353 468 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 FUT6P51993 359 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 ERVS71-1P61550 626 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 ZNF45Q02386 682 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 PSG7Q13046 419 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 SNTB2Q13425 540 aaKnown RBP12.14□□□□□ -0.47
VPS26A-205ENST00000489656 ZNF846Q147U1 533 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 KISS1Q15726 138 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 SPATA46Q5T0L3 261 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 OR2T2Q6IF00 324 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 LHFPL2Q6ZUX7 228 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 LRRC28Q86X40 367 aaPredicted RBP12.14□□□□□ -0.47
VPS26A-205ENST00000489656 OR5H6Q8NGV6 325 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 PIGCQ92535 297 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 CEP19Q96LK0 163 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 CNTD2Q9H8S5 307 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 OR5V1Q9UGF6 321 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 SLC7A11Q9UPY5 501 aa12.14□□□□□ -0.47
VPS26A-205ENST00000489656 RELNP78509 3460 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 A0A0B4J203 849 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 LOC100289279A0A1B0GTE1 492 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 DPRXA6NFQ7 191 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 ZNF850A8MQ14 1090 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 ATP6V1G2-DDX39BF2Z307 99 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 LDLRAD4O15165 306 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 BPNT1O95861 308 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 OCMP0CE72 109 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-205ENST00000489656 ZNF250P15622 560 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 PTBP1P26599 531 aaKnown RBP eCLIP12.13□□□□□ -0.47
VPS26A-205ENST00000489656 MPV17P39210 176 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 EVX1P49640 407 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 CLDN12P56749 244 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 PRDX4Q13162 271 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 UBE2NLQ5JXB2 153 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 SPANXN2Q5MJ10 180 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 PLCXD3Q63HM9 321 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 RGS7BPQ6MZT1 257 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-205ENST00000489656 ALKBH2Q6NS38 261 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 METAP1DQ6UB28 335 aaPredicted RBP12.13□□□□□ -0.47
VPS26A-205ENST00000489656 MOB3CQ70IA8 216 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 ZDHHC23Q8IYP9 409 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 SAMD12Q8N8I0 201 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 PNLDC1Q8NA58 520 aaKnown RBP12.13□□□□□ -0.47
VPS26A-205ENST00000489656 OR4D6Q8NGJ1 314 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 PTX4Q96A99 478 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 FAM3DQ96BQ1 224 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 ZC3HAV1LQ96H79 300 aaKnown RBP12.13□□□□□ -0.47
VPS26A-205ENST00000489656 PAPOLGQ9BWT3 736 aaKnown RBP12.13□□□□□ -0.47
VPS26A-205ENST00000489656 CXorf56Q9H5V9 222 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 CYSLTR2Q9NS75 346 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 CRIM1Q9NZV1 1036 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 FBLN5Q9UBX5 448 aa12.13□□□□□ -0.47
VPS26A-205ENST00000489656 PURGQ9UJV8 347 aaKnown RBP12.13□□□□□ -0.47
VPS26A-205ENST00000489656 NOP16Q9Y3C1 178 aaKnown RBP12.13□□□□□ -0.47
VPS26A-205ENST00000489656 A0A1B0GWJ7 208 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 ZG16O60844 167 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 UBBP0CG47 229 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 NAT2P11245 290 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 ELK1P19419 428 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 GRNP28799 593 aaKnown RBP12.12□□□□□ -0.47
VPS26A-205ENST00000489656 GCH1P30793 250 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 PEX19P40855 299 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 POU3F4P49335 361 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 RBP2P50120 134 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 ZP1P60852 638 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 BSPH1Q075Z2 132 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 P2RY14Q15391 338 aa12.12□□□□□ -0.47
VPS26A-205ENST00000489656 CEACAM21Q3KPI0 293 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms