RNA–Protein interactions for RNA: ENST00000489629.1

CPSF3-205, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 3

Gene CPSF3, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-205ENST00000489629 TALDO1P37837 337 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 CLDN6P56747 220 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 PITPNAQ00169 270 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 PPIDQ08752 370 aaKnown RBP1.23□□□□□ -2.21
CPSF3-205ENST00000489629 PNOCQ13519 176 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 NDUFAF6Q330K2 333 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 TPRG1LQ5T0D9 272 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 OR2T5Q6IEZ7 315 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 EPGNQ6UW88 154 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 CD300LGQ6UXG3 332 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 UNQ9165/PRO28630Q6UXU0 137 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 SLC35D2Q76EJ3 337 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 TMEM256Q8N2U0 113 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 ASCC1Q8N9N2 400 aaKnown RBP1.23□□□□□ -2.21
CPSF3-205ENST00000489629 SPANXA2-OT1Q8N9U9 137 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 C19orf18Q8NEA5 215 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 TTLQ8NG68 377 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 OR2T29Q8NH02 315 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 RXFP2Q8WXD0 754 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 GPR21Q99679 349 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 TBL1YQ9BQ87 522 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 TMEM243Q9BU79 118 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 CALN1Q9BXU9 219 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 MAP1LC3CQ9BXW4 147 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 TOLLIPQ9H0E2 274 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 KIR3DX1Q9H7L2 352 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 REEP1Q9H902 201 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 EXOSC4Q9NPD3 245 aaKnown RBP1.23□□□□□ -2.21
CPSF3-205ENST00000489629 CARHSP1Q9Y2V2 147 aaKnown RBP1.23□□□□□ -2.21
CPSF3-205ENST00000489629 SIGLEC9Q9Y336 463 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 KLF12Q9Y4X4 402 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 OR51B2Q9Y5P1 312 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 MIA3Q5JRA6 1907 aa1.23□□□□□ -2.21
CPSF3-205ENST00000489629 NID2Q14112 1375 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 CCL15-CCL14A0A0B4J2E2 113 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 A0A0J9YYE9 177 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 OR5H1A6NKK0 313 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 A8MUU9 505 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 HACD1B0YJ81 288 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 NDUFS8O00217 210 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 EIF1BO60739 113 aaKnown RBP1.22□□□□□ -2.21
CPSF3-205ENST00000489629 LCA5LO95447 670 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 PAHP00439 452 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 GCGP01275 180 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 IGLV2-8P01709 118 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 TRBC1P01850 177 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 RAB5AP20339 215 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 MYL9P24844 172 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 COL8A2P25067 703 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 IVDP26440 423 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 CSKP41240 450 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 EIF1P41567 113 aaKnown RBP1.22□□□□□ -2.21
CPSF3-205ENST00000489629 ETV1P50549 477 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 OR2B8PP59922 312 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 ZNF616Q08AN1 781 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 TFDP2Q14188 446 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 PIGHQ14442 188 aaPredicted RBP1.22□□□□□ -2.21
CPSF3-205ENST00000489629 WDR43Q15061 677 aaKnown RBP eCLIP1.22□□□□□ -2.21
CPSF3-205ENST00000489629 OR1Q1Q15612 314 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 CCL15Q16663 113 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 TEX30Q5JUR7 227 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 AADACL4Q5VUY2 407 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 TMEM236Q5W0B7 351 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 APOBEC3HQ6NTF7 200 aaKnown RBP1.22□□□□□ -2.21
CPSF3-205ENST00000489629 RWDD4Q6NW29 188 aaKnown RBP1.22□□□□□ -2.21
CPSF3-205ENST00000489629 RTL4Q6ZR62 310 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 OR2W3Q7Z3T1 314 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 ARHGAP18Q8N392 663 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 UBAC2Q8NBM4 344 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 OR4M1Q8NGD0 313 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 OR1J4Q8NGS1 313 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 OR9A2Q8NGT5 310 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 MITD1Q8WV92 249 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 GHSRQ92847 366 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 C20orf144Q9BQM9 153 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 SULT4A1Q9BR01 284 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 HINT2Q9BX68 163 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 PRRG3Q9BZD7 231 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 OR51B5Q9H339 312 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 GAL3ST2Q9H3Q3 398 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 FBXO6Q9NRD1 293 aaPredicted RBP1.22□□□□□ -2.21
CPSF3-205ENST00000489629 TMEM100Q9NV29 134 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 STMN3Q9NZ72 180 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 ENOPH1Q9UHY7 261 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 CES1P1Q9UKY3 287 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 RBMX2Q9Y388 322 aaKnown RBP1.22□□□□□ -2.21
CPSF3-205ENST00000489629 CBY1Q9Y3M2 126 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 DYSFO75923 2080 aa1.22□□□□□ -2.21
CPSF3-205ENST00000489629 A0A0A6YYD5 115 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 ERICH4A6NGS2 130 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 TVP23AA6NH52 213 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 LINC01619G3V211 115 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 K7EM74 188 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 DFFAO00273 331 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 RFXANKO14593 260 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 SMC2O95347 1197 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 PLEKHA8P1O95397 391 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 CYB5R3P00387 301 aaPredicted RBP1.21□□□□□ -2.22
CPSF3-205ENST00000489629 TRBV12-3P01733 135 aa1.21□□□□□ -2.22
CPSF3-205ENST00000489629 MT-ND4P03905 459 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms