RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 PCDHGB1Q9Y5G3 927 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 CUBNO60494 3623 aa11.21□□□□□ -0.61
CCL28-202ENST00000489442 LOC100130705A0A1B0GUX0 176 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 DAPL1A0PJW8 107 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 F5H0A9 414 aaPredicted RBP11.2□□□□□ -0.62
CCL28-202ENST00000489442 LGALS8O00214 317 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 SULT1C4O75897 302 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 TTRP02766 147 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 CD80P33681 288 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 ACTC1P68032 377 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 ACTA1P68133 377 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 ZNF154Q13106 437 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 RCN1Q15293 331 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 LIPNQ5VXI9 398 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 ELMOD2Q8IZ81 293 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 LRRC29Q8WV35 223 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 OR5P3Q8WZ94 311 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 ITPKCQ96DU7 683 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 ADI1Q9BV57 179 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 METTL17Q9H7H0 456 aaPredicted RBP11.2□□□□□ -0.62
CCL28-202ENST00000489442 RNPEPL1Q9HAU8 725 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 SMPD3Q9NY59 655 aaPredicted RBP11.2□□□□□ -0.62
CCL28-202ENST00000489442 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 ENPP5Q9UJA9 477 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 GNG8Q9UK08 70 aa11.2□□□□□ -0.62
CCL28-202ENST00000489442 LOC105371242A0A075B767 164 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 PPIAL4CA0A0B4J2A2 164 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 OOEPA6NGQ2 149 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 TMEM210A6NLX4 147 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 ANKRD65E5RJM6 399 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 P2RY10O00398 339 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 CDIPTO14735 213 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 NDUFA2O43678 99 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 DHRS3O75911 302 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 FAHP16930 419 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 PITPNBP48739 271 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 GPM6AP51674 278 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 CSNK2BP67870 215 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 ODF4Q2M2E3 257 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 TP53I3Q53FA7 332 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 CEP78Q5JTW2 689 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 PLCXD3Q63HM9 321 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 LYPD2Q6UXB3 125 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 MOB3CQ70IA8 216 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 WDR86Q86TI4 376 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 ENTHD1Q8IYW4 607 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 GCSAMQ8N6F7 178 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 MRPL48Q96GC5 212 aaKnown RBP11.19□□□□□ -0.62
CCL28-202ENST00000489442 RDH12Q96NR8 316 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 MYCBPQ99417 103 aaPredicted RBP11.19□□□□□ -0.62
CCL28-202ENST00000489442 TMPRSS13Q9BYE2 586 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 OCEL1Q9H607 264 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 MMP26Q9NRE1 261 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 ERVK-18Q9QC07 812 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 AASSQ9UDR5 926 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 SLC22A13Q9Y226 551 aa11.19□□□□□ -0.62
CCL28-202ENST00000489442 FBN1P35555 2871 aaKnown RBP11.18□□□□□ -0.62
CCL28-202ENST00000489442 A0A1B0GVI7 797 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 E9PQ18 207 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 TRAPPC2LH3BP13 241 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 ADAM20O43506 726 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 SRSF10O75494 262 aaKnown RBP11.18□□□□□ -0.62
CCL28-202ENST00000489442 NRASP01111 189 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 GYPAP02724 150 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 THBS2P35442 1172 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 GMFBP60983 142 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 GNG3P63215 75 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 HOXA4Q00056 320 aaPredicted RBP11.18□□□□□ -0.62
CCL28-202ENST00000489442 MICBQ29980 383 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 CEACAM21Q3KPI0 293 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 ZNF684Q5T5D7 378 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 ZBTB37Q5TC79 503 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 BTNL3Q6UXE8 466 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 WDR82Q6UXN9 313 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 DOK3Q7L591 496 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 KCTD20Q7Z5Y7 419 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 C11orf53Q8IXP5 236 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 ACBD7Q8N6N7 88 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 RHOXF1Q8NHV9 184 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 NANPQ8TBE9 248 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 RPL3LQ92901 407 aaKnown RBP11.18□□□□□ -0.62
CCL28-202ENST00000489442 TECTBQ96PL2 329 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 MRI1Q9BV20 369 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 PLEKHA1Q9HB21 404 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 C8orf4Q9NR00 106 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 DNAJB11Q9UBS4 358 aa11.18□□□□□ -0.62
CCL28-202ENST00000489442 POLR3KQ9Y2Y1 108 aaPredicted RBP11.18□□□□□ -0.62
CCL28-202ENST00000489442 IGHV3OR15-7A0A075B7D8 119 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 A8MXK9 166 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 ZNF732B4DXR9 585 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 SLC16A6O15403 523 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 FADS2O95864 444 aaKnown RBP11.17□□□□□ -0.62
CCL28-202ENST00000489442 AVPP01185 164 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 LHBP01229 141 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 IGLV3-1P01715 115 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 ADRA2CP18825 462 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 PSMB10P40306 273 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 ZNF85Q03923 595 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 DMRTC1Q5HYR2 192 aa11.17□□□□□ -0.62
CCL28-202ENST00000489442 CLVS2Q5SYC1 327 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms