RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 M0R296 226 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 LMX1BO60663 402 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 B3GALNT1O75752 331 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SFT2D2O95562 160 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PLATP00750 562 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PDGFAP04085 211 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SFTPBP07988 381 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 LIPCP11150 499 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SLC25A4P12235 298 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 FAHP16930 419 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PVALBP20472 110 aaPredicted RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 CCNOP22674 350 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 NPY4RP50391 375 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SNU13P55769 128 aaKnown RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PLA2G7Q13093 441 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 AIMP2Q13155 320 aaKnown RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 DHRS2Q13268 280 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 ATXN7L3Q14CW9 347 aaPredicted RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 AANATQ16613 207 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SWI5Q1ZZU3 235 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 TMEM128Q5BJH2 165 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 TMEM255AQ5JRV8 349 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 WIPI1Q5MNZ9 446 aaPredicted RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 C11orf87Q6NUJ2 197 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 NHLRC1Q6VVB1 395 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 MKXQ8IYA7 352 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PXT1Q8NFP0 134 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 OR4S1Q8NGB4 309 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 OR4D10Q8NGI6 311 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 OR5D18Q8NGL1 313 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SNIP1Q8TAD8 396 aaKnown RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 FNDC9Q8TBE3 224 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 ROBO4Q8WZ75 1007 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PIGCQ92535 297 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 APH1AQ96BI3 265 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 ZNF524Q96C55 264 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 CRLF2Q9HC73 371 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 RAB18Q9NP72 206 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 NUP214P35658 2090 aaPredicted RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 LAMA5O15230 3695 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 NBPF19A0A087WUL8 3843 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 BORCS7-ASMTA0A0B4J1R7 106 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 A0A0J9YW62 118 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 LOC101059948A0A1B0GTJ6 334 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 LEUTXA8MZ59 168 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 LDLRAD4O15165 306 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 EFNA2O43921 213 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 CA11O75493 328 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 DUS4LO95620 317 aaKnown RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 MT-CO3P00414 261 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 ZNF728P0DKX0 622 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 CD79AP11912 226 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PRF1P14222 555 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 B4GALT1P15291 398 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 CTSSP25774 331 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 RGS19P49795 217 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SUCLG1P53597 346 aaKnown RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SRPXP78539 464 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 ARG2P78540 354 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PPP1R1AQ13522 171 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 ZNF345Q14585 488 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 RNPS1Q15287 305 aaKnown RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SLC9A3R2Q15599 337 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 OR1C1Q15619 314 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 STK11Q15831 433 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 HIST3H3Q16695 136 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 CEACAM16Q2WEN9 425 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 MOGAT2Q3SYC2 334 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 VAX1Q5SQQ9 334 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 OR52W1Q6IF63 320 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 ALKAL2Q6UX46 152 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 UNQ6126/PRO20091Q6UXV3 157 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 DNM1P46Q6ZS02 220 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 BMPERQ8N8U9 685 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 TMEM178AQ8NBL3 297 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 OR6K3Q8NGY3 331 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 RNASE11Q8TAA1 199 aaKnown RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 MARCH1Q8TCQ1 289 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 ST8SIA4Q92187 359 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 TMEM45BQ96B21 275 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 CMBLQ96DG6 245 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PHYHIPLQ96FC7 376 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 LIN37Q96GY3 246 aaPredicted RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 ARHGAP5-AS1Q96IT6 56 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 SPACA5Q96QH8 159 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 NKX3-1Q99801 234 aaPredicted RBP2.33□□□□□ -2.04
C9orf72-205ENST00000488117 NMES1Q9C002 83 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 LPAR5Q9H1C0 372 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 GPR35Q9HC97 309 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 TAS2R3Q9NYW6 316 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 GSKIPQ9P0R6 139 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 MBD2Q9UBB5 411 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 VSIG4Q9Y279 399 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 FRYLO94915 3013 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 A0A0B4J2A0 478 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 A0A1B0GTI1 187 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 PLSCR5A0PG75 271 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 B8ZZF3 427 aa2.33□□□□□ -2.04
C9orf72-205ENST00000488117 TRAPPC2LH3BP13 241 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms