RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 MAGEB4O15481 346 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-209ENST00000487617 MFGE8Q08431 387 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-209ENST00000487617 POU4F2Q12837 409 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 KLF17Q5JT82 389 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-209ENST00000487617 TEX36Q5VZQ5 186 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 FAM90A1Q86YD7 464 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 ZDHHC23Q8IYP9 409 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 OR51E1Q8TCB6 317 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 PPP1R14AQ96A00 147 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 DACT3Q96B18 629 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-209ENST00000487617 RNF170Q96K19 258 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 FAM71F1Q96KD3 344 aaPredicted RBP17.01■□□□□ 0.31
HDAC4-209ENST00000487617 HIST1H2AAQ96QV6 131 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 JMJD8Q96S16 334 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 TLNRD1Q9H1K6 362 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 GPR84Q9NQS5 396 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 NUFIP1Q9UHK0 495 aaKnown RBP17.01■□□□□ 0.31
HDAC4-209ENST00000487617 ORC6Q9Y5N6 252 aa17.01■□□□□ 0.31
HDAC4-209ENST00000487617 ZNF816-ZNF321PA0A0X1KG74 233 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 TMEM210A6NLX4 147 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 LOC110117498-PIK3R3F6TDL0 507 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 EBAG9O00559 213 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 HTR1FP30939 366 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 MICBQ29980 383 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17■□□□□ 0.31
HDAC4-209ENST00000487617 OR8J1Q8NGP2 316 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 ZFAND2BQ8WV99 257 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 RPL3LQ92901 407 aaKnown RBP17■□□□□ 0.31
HDAC4-209ENST00000487617 TBX5Q99593 518 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 ZNF69Q9UC07 566 aa17■□□□□ 0.31
HDAC4-209ENST00000487617 C22orf46C9J442 243 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 ENSAO43768 121 aaKnown RBP16.99■□□□□ 0.31
HDAC4-209ENST00000487617 ALPLP05186 524 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 ATP6V1B1P15313 513 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 MUC1P15941 1255 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-209ENST00000487617 CFHR2P36980 270 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 CDC42P60953 191 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 EGR3Q06889 387 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 RIPPLY1Q0D2K3 151 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 CD276Q5ZPR3 534 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 PLEKHG7Q6ZR37 379 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 THAP5Q7Z6K1 395 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 C10orf67Q8IYJ2 551 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 HPSE2Q8WWQ2 592 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 ITFG2Q969R8 447 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 FGF23Q9GZV9 251 aaPredicted RBP16.99■□□□□ 0.31
HDAC4-209ENST00000487617 RASSF4Q9H2L5 321 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 SMURF1Q9HCE7 757 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 MRM2Q9UI43 246 aaKnown RBP16.99■□□□□ 0.31
HDAC4-209ENST00000487617 R4GMQ9 66 aa16.99■□□□□ 0.31
HDAC4-209ENST00000487617 IGHV3OR16-10A0A075B7F0 116 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 TRIM77I1YAP6 450 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 EI24O14681 340 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 TMPRSS2O15393 492 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 SRSF10O75494 262 aaKnown RBP16.98■□□□□ 0.31
HDAC4-209ENST00000487617 APOL3O95236 402 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 IGLV3-1P01715 115 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 TTRP02766 147 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 PPIAL4GP0DN37 164 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 ATP6V1E1P36543 226 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 GPM6AP51674 278 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 GMFBP60983 142 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 CEP78Q5JTW2 689 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 BCL2L15Q5TBC7 163 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 RBMS3Q6XE24 437 aaKnown RBP16.98■□□□□ 0.31
HDAC4-209ENST00000487617 SCCPDHQ8NBX0 429 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 EME1Q96AY2 570 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 UPRTQ96BW1 309 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 SEH1LQ96EE3 360 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 MOB1AQ9H8S9 216 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 IMPAD1Q9NX62 359 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 USE1Q9NZ43 259 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 OR52A1Q9UKL2 312 aa16.98■□□□□ 0.31
HDAC4-209ENST00000487617 SRRM5B3KS81 715 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-209ENST00000487617 MTRF1O75570 445 aaKnown RBP16.97■□□□□ 0.31
HDAC4-209ENST00000487617 OR2T7P0C7T2 308 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 IGHV4-38-2P0DP08 117 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 FGF12P61328 243 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 FAM76BQ5HYJ3 339 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 MOB3CQ70IA8 216 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 KRT74Q7RTS7 529 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 SSX6Q7RTT6 188 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 BCL6BQ8N143 479 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-209ENST00000487617 SIGLECL1Q8N7X8 197 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 YIPF7Q8N8F6 280 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 OR10H4Q8NGA5 316 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 OR10Z1Q8NGY1 313 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 OR2T27Q8NH04 317 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 RFKQ969G6 155 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 CCL13Q99616 98 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 MS4A7Q9GZW8 240 aaPredicted RBP16.97■□□□□ 0.31
HDAC4-209ENST00000487617 KAAG1Q9UBP8 84 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 PIGLQ9Y2B2 252 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 SNX5Q9Y5X3 404 aa16.97■□□□□ 0.31
HDAC4-209ENST00000487617 A0A1W2PQL4 384 aaPredicted RBP16.96■□□□□ 0.31
HDAC4-209ENST00000487617 ZNF732B4DXR9 585 aa16.96■□□□□ 0.31
HDAC4-209ENST00000487617 DVL1O14640 695 aa16.96■□□□□ 0.31
HDAC4-209ENST00000487617 DHRS3O75911 302 aa16.96■□□□□ 0.31
HDAC4-209ENST00000487617 RPP14O95059 124 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms