RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 NECAP2Q9NVZ3 263 aa6.85□□□□□ -1.31
COL6A4P1-202ENST00000487147 TET1Q8NFU7 2136 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 A0A087WV48 116 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 A0A087X0M5 115 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 A0A1B0GX30 115 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 C2orf72A6NCS6 295 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 BTBD17A6NE02 478 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 HRKO00198 91 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 CYR61O00622 381 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 DDAH2O95865 285 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SCGB1D1O95968 90 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 IGKV1D-16P01601 117 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 LCATP04180 440 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 MST1P26927 711 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SRSF3P84103 164 aaKnown RBP6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 PCK2Q16822 640 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 NSUN5P2Q63ZY6 315 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SHISA6Q6ZSJ9 500 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 DOK3Q7L591 496 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 CATSPERDQ86XM0 798 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SFTPA1Q8IWL2 248 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 TMEM123Q8N131 208 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF709Q8N972 641 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SPTSSAQ969W0 71 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 ANKRD9Q96BM1 317 aaPredicted RBP6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 TCTN2Q96GX1 697 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SUCNR1Q9BXA5 334 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 MYOZ1Q9NP98 299 aaPredicted RBP6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 METTL1Q9UBP6 276 aaKnown RBP6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 GPR137BO60478 399 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 PNPP00491 289 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SERPINE2P07093 398 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 VSIG8P0DPA2 414 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SELLP14151 372 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 MESP2Q0VG99 397 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 MALLQ13021 153 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 FZD5Q13467 585 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 TGIF1Q15583 401 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 GGNBP1Q5YKI7 109 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 ZNF429Q86V71 674 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SEMA6DQ8NFY4 1073 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 ADAMTS17Q8TE56 1095 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 RRNAD1Q96FB5 475 aaKnown RBP6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 MEGF10Q96KG7 1140 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 CABLES2Q9BTV7 478 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 MOB1AQ9H8S9 216 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 FBRSQ9HAH7 460 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 GDE1Q9NZC3 331 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 GNG13Q9P2W3 67 aa6.84□□□□□ -1.31
COL6A4P1-202ENST00000487147 SOCS1O15524 211 aa6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 SPINT1O43278 529 aa6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 EIF1BO60739 113 aaKnown RBP6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 SEMA4FO95754 770 aa6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 QDPRP09417 244 aa6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 EIF1P41567 113 aaKnown RBP6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF133P52736 654 aaPredicted RBP6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 SRPXP78539 464 aa6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 RPL19P84098 196 aaKnown RBP6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 SRSF5Q13243 272 aaKnown RBP6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 DEGS2Q6QHC5 323 aa6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 GKN2Q86XP6 184 aa6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 CCDC74BQ96LY2 380 aa6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 ASB16Q96NS5 453 aa6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 GPX7Q96SL4 187 aaPredicted RBP6.84□□□□□ -1.32
COL6A4P1-202ENST00000487147 NSG1A0A0A6YYJ2 146 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 A0A1B0GTI1 187 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 TCRBV21S2A2A0A5A6 115 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 LINC01553A4QN01 128 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 OR7C1O76099 320 aaPredicted RBP6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 CD1CP29017 333 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 ID4P47928 161 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 ASCL1P50553 236 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 H3F3AP84243 136 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 ADIRFQ15847 76 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF260Q3ZCT1 412 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 FAM69BQ5VUD6 431 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 NPSR1Q6W5P4 371 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 GPR119Q8TDV5 335 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 HPSE2Q8WWQ2 592 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 PTX4Q96A99 478 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 NAA11Q9BSU3 229 aaPredicted RBP6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 DTX4Q9Y2E6 619 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 WSB1Q9Y6I7 421 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 DBX1A6NMT0 343 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 SERPINE3A8MV23 424 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 TGOLN2O43493 480 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 TK1P04183 234 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 CCNOP22674 350 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 EFNA3P52797 238 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF117Q03924 483 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 ZNF528Q3MIS6 628 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 FAM174AQ8TBP5 190 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 C11orf40Q8WZ69 217 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 RBMXL1Q96E39 390 aaKnown RBP6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 GNPNAT1Q96EK6 184 aaPredicted RBP6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 TOX2Q96NM4 488 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 CUTCQ9NTM9 273 aa6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 TMEM184BQ9Y519 407 aaPredicted RBP6.83□□□□□ -1.32
COL6A4P1-202ENST00000487147 RP1P56715 2156 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms