RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TRBV12-3P01733 135 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 SLC35G6P0C7Q6 338 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 ZNF286BP0CG31 522 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 PTNP21246 168 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 PMELP40967 661 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 PRLHRP49683 370 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 UBE2E1P51965 193 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 CARD18P57730 90 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 TAS2R60P59551 318 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 SLC35A1P78382 337 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 SLC35B1P78383 322 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 ATP6V1FQ16864 119 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 SLC25A35Q3KQZ1 300 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 C6orf99Q4VX62 202 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 DAW1Q8N136 415 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 ZNF615Q8N8J6 731 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 ZNF709Q8N972 641 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 OR5T1Q8NG75 326 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 OR13C9Q8NGT0 318 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 OR1L1Q8NH94 360 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 C17orf50Q8WW18 174 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 TFGQ92734 400 aaPredicted RBP2.66□□□□□ -1.98
SMC4-218ENST00000486711 TOP1MTQ969P6 601 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 UBE2E2Q96LR5 201 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 Q96MT0 163 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 NUDT9Q9BW91 350 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 TM6SF2Q9BZW4 377 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 C6orf50Q9HD87 102 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 C21orf62Q9NYP8 219 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 NDRG2Q9UN36 371 aaKnown RBP2.66□□□□□ -1.98
SMC4-218ENST00000486711 SIGLEC9Q9Y336 463 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 CBY1Q9Y3M2 126 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 LRRC42Q9Y546 428 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 MROH5Q6ZUA9 1318 aa2.66□□□□□ -1.98
SMC4-218ENST00000486711 IGLV2-18A0A075B6J9 118 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 IGLV3-12A0A075B6K2 115 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 COLCA2A8K830 154 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 LINC01619G3V211 115 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 H7C2Y5 167 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 ARR3P36575 388 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 MTPNP58546 118 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 DMC1Q14565 340 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 PRSS8Q16651 343 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 CPTPQ5TA50 214 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 STEAP4Q687X5 459 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 DRAM1Q8N682 238 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 RNF182Q8N6D2 247 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 ASCC1Q8N9N2 400 aaKnown RBP2.65□□□□□ -1.99
SMC4-218ENST00000486711 GATSQ8NAP1 163 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 OR4A15Q8NGL6 344 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 TMEM234Q8WY98 164 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 RNF170Q96K19 258 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 RSPO3Q9BXY4 272 aaPredicted RBP2.65□□□□□ -1.99
SMC4-218ENST00000486711 ARV1Q9H2C2 271 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 RBFOX1Q9NWB1 397 aaKnown RBP2.65□□□□□ -1.99
SMC4-218ENST00000486711 SIGLEC7Q9Y286 467 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 ARID1AO14497 2285 aa2.65□□□□□ -1.99
SMC4-218ENST00000486711 TNIKQ9UKE5 1360 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 MYO10Q9HD67 2058 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 TRAV8-4A0A0B4J246 113 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 KDELR3O43731 214 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 PTTG1O95997 202 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 P01737 135 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 RPN2P04844 631 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 RHOCP08134 193 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 PRKACBP22694 351 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 CXCR1P25024 350 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 PSMB5P28074 263 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 HCCSP53701 268 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 INCA1Q0VD86 236 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 MOBPQ13875 183 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 TMEM236Q5W0B7 351 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 DUPD1Q68J44 220 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 UNQ9165/PRO28630Q6UXU0 137 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 HMGN2P46Q86SG4 172 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 SLC7A5P1Q8MH63 180 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 FAM58AQ8N1B3 248 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 OR4M2Q8NGB6 313 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 SFXN5Q8TD22 340 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 CIDECQ96AQ7 238 aaPredicted RBP2.64□□□□□ -1.99
SMC4-218ENST00000486711 SNF8Q96H20 258 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 CENPNQ96H22 339 aaPredicted RBP2.64□□□□□ -1.99
SMC4-218ENST00000486711 TSNAXQ99598 290 aaKnown RBP2.64□□□□□ -1.99
SMC4-218ENST00000486711 ZNF717Q9BY31 904 aaPredicted RBP2.64□□□□□ -1.99
SMC4-218ENST00000486711 OR51B5Q9H339 312 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 HEBP1Q9NRV9 189 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 CFL2Q9Y281 166 aa2.64□□□□□ -1.99
SMC4-218ENST00000486711 FARSAQ9Y285 508 aaKnown RBP2.64□□□□□ -1.99
SMC4-218ENST00000486711 AHDC1Q5TGY3 1603 aaPredicted RBP2.64□□□□□ -1.99
SMC4-218ENST00000486711 IGHV1-3A0A0C4DH29 117 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 A0A1W2PQ67 120 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 SEC14L6B5MCN3 397 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 SMC2O95347 1197 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 MMP7P09237 267 aaPredicted RBP2.63□□□□□ -1.99
SMC4-218ENST00000486711 CCDC172P0C7W6 258 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 SLC25A25Q6KCM7 469 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 LRRC52Q8N7C0 313 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 DEDD2Q8WXF8 326 aa2.63□□□□□ -1.99
SMC4-218ENST00000486711 ZNF75CPQ92670 426 aaPredicted RBP2.63□□□□□ -1.99
SMC4-218ENST00000486711 MRPL48Q96GC5 212 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms