RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 GINS4Q9BRT9 223 aa10.41□□□□□ -0.74
PKP4-213ENST00000486254 TP63Q9H3D4 680 aaPredicted RBP10.41□□□□□ -0.74
PKP4-213ENST00000486254 LDAHQ9H6V9 325 aa10.41□□□□□ -0.74
PKP4-213ENST00000486254 CLCF1Q9UBD9 225 aa10.41□□□□□ -0.74
PKP4-213ENST00000486254 KLK13Q9UKR3 277 aa10.41□□□□□ -0.74
PKP4-213ENST00000486254 ING4Q9UNL4 249 aa10.41□□□□□ -0.74
PKP4-213ENST00000486254 PLEKHA6Q9Y2H5 1048 aa10.41□□□□□ -0.74
PKP4-213ENST00000486254 MUC6Q6W4X9 2439 aa10.41□□□□□ -0.74
PKP4-213ENST00000486254 TNRC6AQ8NDV7 1962 aaKnown RBP10.41□□□□□ -0.74
PKP4-213ENST00000486254 ZNF816-ZNF321PA0A0X1KG74 233 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 A6NL46 340 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 A8MV72 311 aaPredicted RBP10.4□□□□□ -0.74
PKP4-213ENST00000486254 AKR7A2O43488 359 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 ZNF735P0CB33 412 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 ACKR3P25106 362 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 OR3A2P47893 321 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 NOVA1P51513 510 aaKnown RBP10.4□□□□□ -0.74
PKP4-213ENST00000486254 NKX2-5P52952 324 aaPredicted RBP10.4□□□□□ -0.74
PKP4-213ENST00000486254 CLN3Q13286 438 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 TMEM53Q6P2H8 277 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 FJX1Q86VR8 437 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 TMEM104Q8NE00 496 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 PXT1Q8NFP0 134 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 OR51S1Q8NGJ8 323 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 NANOS1Q8WY41 292 aaKnown RBP10.4□□□□□ -0.74
PKP4-213ENST00000486254 PIGTQ969N2 578 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 RAB3CQ96E17 227 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 DMRTB1Q96MA1 342 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 NKX3-1Q99801 234 aaPredicted RBP10.4□□□□□ -0.74
PKP4-213ENST00000486254 OCSTAMPQ9BR26 566 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 GON7Q9BXV9 100 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 OR10A4Q9H209 315 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 CALHM2Q9HA72 323 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 B3GNT2Q9NY97 397 aa10.4□□□□□ -0.74
PKP4-213ENST00000486254 RIF1Q5UIP0 2472 aaKnown RBP10.4□□□□□ -0.75
PKP4-213ENST00000486254 DISC1C4P0D8 188 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 PYCARD-AS1I3L0S3 204 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 MPIG6BO95866 241 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 RBP2P50120 134 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 FAM3AP98173 230 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 GK2Q14410 553 aaPredicted RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 GUSBP1Q15486 140 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 NDUFA5Q16718 116 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 RNASE10Q5GAN6 216 aaKnown RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 VAX1Q5SQQ9 334 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 FBXW9Q5XUX1 488 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 FAHD2BQ6P2I3 314 aaPredicted RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 ZDHHC22Q8N966 263 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 FGFBP3Q8TAT2 258 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 TNFAIP8L1Q8WVP5 186 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 APOBEC3DQ96AK3 386 aaPredicted RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 FAHD2AQ96GK7 314 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 RADILQ96JH8 1075 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 S100A13Q99584 98 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 GAL3ST1Q99999 423 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 SELENOIQ9C0D9 397 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 SLA2Q9H6Q3 261 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 PCDHB16Q9NRJ7 776 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 NKIRAS2Q9NYR9 191 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 KCNN3Q9UGI6 736 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 ZNF292O60281 2723 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 FAM186AA6NE01 2351 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 A0A0A6YYD4 124 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 UBE2QL1A1L167 161 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 OR14I1A6ND48 311 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 CEACAM18A8MTB9 384 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 SSNA1O43805 119 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 HPXP02790 462 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 GIPP09681 153 aaPredicted RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 HOXB1P14653 301 aaPredicted RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 MGMTP16455 207 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 WT1P19544 449 aaPredicted RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 FUT6P51993 359 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 GNG2P59768 71 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 IFITM2Q01629 132 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 MPPED2Q15777 294 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 FAAP20Q6NZ36 180 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 TRAPPC6BQ86SZ2 158 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 ARRDC1Q8N5I2 433 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 ZSCAN4Q8NAM6 433 aaPredicted RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 CPEB3Q8NE35 698 aaKnown RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 CSNK2A3Q8NEV1 391 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 OR4D10Q8NGI6 311 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 ST8SIA4Q92187 359 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 Q96M66 194 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 SPACA5Q96QH8 159 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 REPIN1Q9BWE0 567 aaKnown RBP10.39□□□□□ -0.75
PKP4-213ENST00000486254 BEX2Q9BXY8 128 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 IFT46Q9NQC8 304 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 HSF4Q9ULV5 492 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 FLVCR2Q9UPI3 526 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 KCNMB2Q9Y691 235 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 GVINP1Q7Z2Y8 2422 aa10.39□□□□□ -0.75
PKP4-213ENST00000486254 PRSS44E7EML9 344 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 FABP7O15540 132 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 TPD52L2O43399 206 aaKnown RBP10.38□□□□□ -0.75
PKP4-213ENST00000486254 SSX5O60225 188 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 CRTAPO75718 401 aaPredicted RBP10.38□□□□□ -0.75
PKP4-213ENST00000486254 OR2A4O95047 310 aa10.38□□□□□ -0.75
PKP4-213ENST00000486254 NRASP01111 189 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms