RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 CTLA4P16410 223 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 PTAFRP25105 342 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 CSF2RBP32927 897 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 ARR3P36575 388 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 NPY4RP50391 375 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 FZD5Q13467 585 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 PCK2Q16822 640 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 CEACAM16Q2WEN9 425 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 OR2W3Q7Z3T1 314 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 NOXO1Q8NFA2 376 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 NUBPLQ8TB37 319 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 RASL10BQ96S79 203 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 UBL7Q96S82 380 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-228ENST00000486227 MS4A7Q9GZW8 240 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-228ENST00000486227 MRPS18AQ9NVS2 196 aaKnown RBP9.85□□□□□ -0.83
HDAC6-228ENST00000486227 C1orf123Q9NWV4 160 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 NKX6-3A6NJ46 265 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 TO15178 435 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 PDGFBP01127 241 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-228ENST00000486227 RPA2P15927 270 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 RBP2P50120 134 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 WDR38Q5JTN6 314 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 C11orf87Q6NUJ2 197 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 IL34Q6ZMJ4 242 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 OR1S1Q8NH92 325 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 SECTM1Q8WVN6 248 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 C22orf15Q8WYQ4 148 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 KCNJ15Q99712 375 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 ZFP64Q9NPA5 681 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 AKR7LQ8NHP1 331 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 KISS1RQ969F8 398 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-228ENST00000486227 TRAPPC2LQ9UL33 140 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 IGKV1D-16P01601 117 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 IGHA1P01876 353 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 FUT5Q11128 374 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 OR5AS1Q8N127 324 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 SLC25A45Q8N413 288 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 OR6K3Q8NGY3 331 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 NUDCD2Q8WVJ2 157 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 SLAMF9Q96A28 289 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 NPAS1Q99742 590 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 PTDSS2Q9BVG9 487 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 GNG12Q9UBI6 72 aa9.85□□□□□ -0.83
HDAC6-228ENST00000486227 IGHV3-64DA0A0J9YX35 117 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 ZNF705GA8MUZ8 300 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 SELEP16581 610 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 MEOX1P50221 254 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 LGALS4P56470 323 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 ETFDHQ16134 617 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 NHLRC1Q6VVB1 395 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 C4orf45Q96LM5 186 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 LRRC37A2A6NM11 1700 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 PLPP3O14495 311 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 LANCL1O43813 399 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 MPZL1O95297 269 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 GALNSP34059 522 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 ISXQ2M1V0 245 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 GPR157Q5UAW9 335 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 FJX1Q86VR8 437 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 C9orf40Q8IXQ3 194 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 LFNGQ8NES3 379 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 FOXJ3Q9UPW0 622 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 ANKRD20A5PA0PJZ0 165 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 C5orf49A4QMS7 147 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 SERPINF1P36955 418 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 MFGE8Q08431 387 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 SKP2Q13309 424 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 LTC4SQ16873 150 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 IAH1Q2TAA2 248 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 Q5BKY6 102 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 MUC20Q8N307 709 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 GLYATL2Q8WU03 294 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 H1FXQ92522 213 aaKnown RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 SCARF2Q96GP6 870 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 MTFP1Q9UDX5 166 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 A0A1W2PPH5 198 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 RER1O15258 196 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 ACAA2P42765 397 aaKnown RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 LYG2Q86SG7 212 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 FGF11Q92914 225 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 INTS12Q96CB8 462 aaKnown RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 ZNF501Q96CX3 271 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 TMPRSS13Q9BYE2 586 aa9.84□□□□□ -0.83
HDAC6-228ENST00000486227 ZNF275Q9NSD4 429 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-228ENST00000486227 M0R1B8 84 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 HPP00738 406 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 GRPP07492 148 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 FTH1P19P0C7X4 201 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 PTHLHP12272 177 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 FAM213BQ8TBF2 198 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 BCO1Q9HAY6 547 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 GHRLQ9UBU3 117 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 SCN2AQ99250 2005 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 CD300LBA8K4G0 201 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 CYB5BO43169 146 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 JTBO76095 146 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 FAHP16930 419 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 TAF9Q16594 264 aa9.83□□□□□ -0.84
HDAC6-228ENST00000486227 FBXW12Q6X9E4 464 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms