RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 FAM76BQ5HYJ3 339 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 NXNL2Q5VZ03 156 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 C12orf73Q69YU5 71 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 BCDIN3DQ7Z5W3 292 aaKnown RBP15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 CNN2Q99439 309 aaKnown RBP15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 SMURF1Q9HCE7 757 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 ENOPH1Q9UHY7 261 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 COPS3Q9UNS2 423 aa15.28■□□□□ 0.04
PRPF40A-209ENST00000486100 TRAV40A0A0B4J280 105 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 SLC22A31A6NKX4 558 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 DVL1O14640 695 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 TMPRSS2O15393 492 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 PRTN3P24158 256 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 MAP2K3P46734 347 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 BAMBIQ13145 260 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 PNLDC1Q8NA58 520 aaKnown RBP15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 OR10Z1Q8NGY1 313 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 RNF170Q96K19 258 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 HIST1H2AAQ96QV6 131 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 MNTQ99583 582 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 PKP2Q99959 881 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 PBOV1Q9GZY1 135 aa15.27■□□□□ 0.04
PRPF40A-209ENST00000486100 ZNF816-ZNF321PA0A0X1KG74 233 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 PRR32B1ATL7 298 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 SRRM5B3KS81 715 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 ZNF879B4DU55 563 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 M0R129 80 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 FCN3O75636 299 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 CIB2O75838 187 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 ECDO95905 644 aaPredicted RBP15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 ATP6V1B1P15313 513 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 CFPP27918 469 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 RIDAP52758 137 aaKnown RBP15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 BPIFB3P59826 476 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 ZNF829Q3KNS6 432 aaPredicted RBP15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 BTN2A1Q7KYR7 527 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 ZDHHC23Q8IYP9 409 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 FAM81AQ8TBF8 368 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 RPL3LQ92901 407 aaKnown RBP15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 C12orf43Q96C57 262 aaKnown RBP15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 CENPNQ96H22 339 aaPredicted RBP15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 IL4I1Q96RQ9 567 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 CCL13Q99616 98 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 ZMAT3Q9HA38 289 aaKnown RBP15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 HAO2Q9NYQ3 351 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 IKZF2Q9UKS7 526 aa15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 SOX21Q9Y651 276 aaPredicted RBP15.26■□□□□ 0.03
PRPF40A-209ENST00000486100 DNAJC9-AS1A6NH13 148 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 P2RY10O00398 339 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 IGLV3-1P01715 115 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 CXCR4P61073 352 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 ACTR3P61158 418 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 WDR38Q5JTN6 314 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 ATPAF1Q5TC12 328 aaPredicted RBP15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 ZNF322Q6U7Q0 402 aaPredicted RBP15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 KCTD8Q6ZWB6 473 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 SLC36A1Q7Z2H8 476 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 GID4Q8IVV7 300 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 SLC35F2Q8IXU6 374 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 SCCPDHQ8NBX0 429 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 OR51E1Q8TCB6 317 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 HPSE2Q8WWQ2 592 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 PPP1R14AQ96A00 147 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 SEH1LQ96EE3 360 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 C1orf147Q96MC9 270 aaPredicted RBP15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 CIB1Q99828 191 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 PCGF1Q9BSM1 259 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 FGF23Q9GZV9 251 aaPredicted RBP15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 SEMA6AQ9H2E6 1030 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 ADGRL4Q9HBW9 690 aa15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 NUFIP1Q9UHK0 495 aaKnown RBP15.25■□□□□ 0.03
PRPF40A-209ENST00000486100 TOX4O94842 621 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 MMP9P14780 707 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 POLR2IP36954 125 aaKnown RBP15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 ELF3P78545 371 aaPredicted RBP15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 RIPPLY1Q0D2K3 151 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 CEACAM21Q3KPI0 293 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 GPR157Q5UAW9 335 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 ASRGL1Q7L266 308 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 THAP5Q7Z6K1 395 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 ST8SIA4Q92187 359 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 WDFY2Q96P53 400 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 DUX5Q96PT3 197 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 APOL4Q9BPW4 351 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 TTTY10Q9BZA0 68 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 GPR84Q9NQS5 396 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 CLN6Q9NWW5 311 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 OAZ3Q9UMX2 235 aa15.24■□□□□ 0.03
PRPF40A-209ENST00000486100 ZNF670-ZNF695F2Z2N8 137 aa15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 CLDN34H7C241 214 aa15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 SRSF10O75494 262 aaKnown RBP15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 SFTPBP07988 381 aa15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 HKR1P10072 659 aa15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 AMY2BP19961 511 aa15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 TGM4P49221 684 aa15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 GPM6AP51674 278 aa15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 GNG3P63215 75 aa15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 EGR3Q06889 387 aa15.23■□□□□ 0.03
PRPF40A-209ENST00000486100 ZBTB37Q5TC79 503 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms