RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ATP6V1E1P36543 226 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 PSMB10P40306 273 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 MAP2K3P46734 347 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 FGF12P61328 243 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 PAX2Q02962 417 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 MFGE8Q08431 387 aaPredicted RBP14.69□□□□□ -0.06
COL6A1-204ENST00000486023 KPNB1Q14974 876 aaKnown RBP14.69□□□□□ -0.06
COL6A1-204ENST00000486023 MICBQ29980 383 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF829Q3KNS6 432 aaPredicted RBP14.69□□□□□ -0.06
COL6A1-204ENST00000486023 WDR82Q6UXN9 313 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 MOB3CQ70IA8 216 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 FAM90A1Q86YD7 464 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 ZDHHC23Q8IYP9 409 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 GALNT4Q8N4A0 578 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 OR5P3Q8WZ94 311 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 ST8SIA4Q92187 359 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 ITPKCQ96DU7 683 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 PCGF1Q9BSM1 259 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 ADGRL4Q9HBW9 690 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 TRIM36Q9NQ86 728 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 GPR84Q9NQS5 396 aa14.69□□□□□ -0.06
COL6A1-204ENST00000486023 TRAV40A0A0B4J280 105 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 C22orf46C9J442 243 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF254O75437 659 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 CST4P01036 141 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 LHBP01229 141 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 GPM6AP51674 278 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 CD276Q5ZPR3 534 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 DEGS2Q6QHC5 323 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 C12orf54Q6X4T0 127 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 USP43Q70EL4 1123 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 GID4Q8IVV7 300 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 GCDHQ92947 438 aaPredicted RBP14.68□□□□□ -0.06
COL6A1-204ENST00000486023 RBM4BQ9BQ04 359 aaKnown RBP14.68□□□□□ -0.06
COL6A1-204ENST00000486023 RNPEPL1Q9HAU8 725 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 SMURF1Q9HCE7 757 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 PIGLQ9Y2B2 252 aa14.68□□□□□ -0.06
COL6A1-204ENST00000486023 A0A1B0GW55 424 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 A6NIN4 97 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF732B4DXR9 585 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 LOC110117498-PIK3R3F6TDL0 507 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 H3BSH0 61 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DVL1O14640 695 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 AKR7A2O43488 359 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 NDUFA2O43678 99 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ENSAO43768 121 aaKnown RBP14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DUX4L2P0CJ85 424 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DUX4L3P0CJ86 424 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DUX4L4P0CJ87 422 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DUX4L5P0CJ88 424 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DUX4L6P0CJ89 424 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DUX4L7P0CJ90 424 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 NPY4RP50391 375 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ACTR3P61158 418 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 EFNB1P98172 346 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ROM1Q03395 351 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 RIPPLY1Q0D2K3 151 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 BAMBIQ13145 260 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 IKZF1Q13422 519 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ODF4Q2M2E3 257 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ZIK1Q3SY52 487 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-204ENST00000486023 BCL2L15Q5TBC7 163 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DUX4L9Q6RFH8 374 aaPredicted RBP14.67□□□□□ -0.06
COL6A1-204ENST00000486023 FGFRL1Q8N441 504 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 YIPF7Q8N8F6 280 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 SCCPDHQ8NBX0 429 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 OSBPL10Q9BXB5 764 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ESM1Q9NQ30 184 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 CLN6Q9NWW5 311 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DNAJB11Q9UBS4 358 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 DUX4Q9UBX2 424 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF391Q9UJN7 358 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ORC6Q9Y5N6 252 aa14.67□□□□□ -0.06
COL6A1-204ENST00000486023 ZNF816-ZNF321PA0A0X1KG74 233 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 ACOD1A6NK06 481 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 TFF1P04155 84 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 FAHP16930 419 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 WDR38Q5JTN6 314 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 TEX36Q5VZQ5 186 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 PLCXD3Q63HM9 321 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 BRD3OSQ6XYD6 125 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 BTN2A1Q7KYR7 527 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 ZDHHC22Q8N966 263 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 OR10H4Q8NGA5 316 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 UBE2FQ969M7 185 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 FGF23Q9GZV9 251 aaPredicted RBP14.66□□□□□ -0.06
COL6A1-204ENST00000486023 WDR13Q9H1Z4 485 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 ABCB9Q9NP78 766 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 OR52A1Q9UKL2 312 aa14.66□□□□□ -0.06
COL6A1-204ENST00000486023 A0A0U1RQV5 110 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 TMEM210A6NLX4 147 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 P2RY10O00398 339 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 TNFRSF13BO14836 293 aaPredicted RBP14.65□□□□□ -0.06
COL6A1-204ENST00000486023 TOX4O94842 621 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 KRT8P05787 483 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 SFTPBP07988 381 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 DCTDP32321 178 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 CDC42P60953 191 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 ARF6P62330 175 aa14.65□□□□□ -0.06
COL6A1-204ENST00000486023 SSX6Q7RTT6 188 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms