RNA–Protein interactions for RNA: ENST00000485450.5

USP4-211, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 3,541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-211ENST00000485450 CH25HO95992 272 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 TGFB1P01137 390 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 IRF2P14316 349 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 ACVR1BP36896 505 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 PTGDSP41222 190 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 EMP2P54851 167 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.79□□□□□ -1.32
USP4-211ENST00000485450 DEFB134Q4QY38 66 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 HEPN1Q6WQI6 88 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 GCNT2Q8N0V5 402 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 RBMXL3Q8N7X1 1067 aaKnown RBP6.79□□□□□ -1.32
USP4-211ENST00000485450 SMPDL3BQ92485 455 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 HAVCR1Q96D42 359 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 KIRREL1Q96J84 757 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 SULT4A1Q9BR01 284 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 ZNF426Q9BUY5 554 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 HINT3Q9NQE9 182 aaKnown RBP6.79□□□□□ -1.32
USP4-211ENST00000485450 TAS2R8Q9NYW2 309 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 ZNF835Q9Y2P0 537 aa6.79□□□□□ -1.32
USP4-211ENST00000485450 DOCK10Q96BY6 2186 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 TEX13DA0A0J9YY54 714 aaPredicted RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 NKX6-3A6NJ46 265 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 NKX2-8O15522 239 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 KLK10O43240 276 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 SCAF4O95104 1147 aaKnown RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 SNRNP70P08621 437 aaKnown RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 CSF1P09603 554 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 PTHLHP12272 177 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 DAOP14920 347 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 IFNGR2P38484 337 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 BUD31P41223 144 aaPredicted RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 EMDP50402 254 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 DVL1P1P54792 670 aaPredicted RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 NDUFA6P56556 154 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 EBPQ15125 230 aaKnown RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 PGGHGQ32M88 737 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 KRTCAP3Q53RY4 240 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 Q5PR19 223 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 PRAMEF8Q5VWM4 474 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 PRAMEF7Q5VXH5 474 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 FCRLAQ7L513 359 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 PPP1R1CQ8WVI7 109 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 TMED6Q8WW62 240 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 ANAPC16Q96DE5 110 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 AKR1E2Q96JD6 320 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 PRRC1Q96M27 445 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 STACQ99469 402 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 FAAP24Q9BTP7 215 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 SLITRK2Q9H156 845 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 HRH4Q9H3N8 390 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 FN3KRPQ9HA64 309 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 NRIP3Q9NQ35 241 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 CYTL1Q9NRR1 136 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 MTFP1Q9UDX5 166 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 KCNG2Q9UJ96 466 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 MRPS33Q9Y291 106 aaKnown RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 FLVCR1Q9Y5Y0 555 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 A0A087WUU8 490 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 IFITM5A6NNB3 132 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 B4GALT2O60909 372 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 NKX2-2O95096 273 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 HLA-GP17693 338 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 CSNK2A2P19784 350 aaPredicted RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 CDK2P24941 298 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 ATP1B3P54709 279 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 TAS2R20P59543 309 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 SLC10A1Q14973 349 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 PCGF3Q3KNV8 242 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 WDR88Q6ZMY6 472 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 MEX3DQ86XN8 651 aaKnown RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 CPOQ8IVL8 374 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 LYG1Q8N1E2 194 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 C16orf52Q8NHV5 167 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 TBX5Q99593 518 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 GFI1Q99684 422 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 NUDT9Q9BW91 350 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 POFUT1Q9H488 388 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 EXO5Q9H790 373 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 PRTFDC1Q9NRG1 225 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 CBLN4Q9NTU7 201 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 ST6GALNAC2Q9UJ37 374 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 KCNE5Q9UJ90 142 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 TMED3Q9Y3Q3 217 aa6.78□□□□□ -1.32
USP4-211ENST00000485450 UBR5O95071 2799 aaPredicted RBP6.78□□□□□ -1.32
USP4-211ENST00000485450 A0A1W2PPK0 400 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 A0A1W2PQD3 144 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 FAM171A2A8MVW0 826 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 M0R3H8 397 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 PHOX2AO14813 284 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 NME2P22392 152 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 SOAT1P35610 550 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 RBM34P42696 430 aaKnown RBP6.77□□□□□ -1.32
USP4-211ENST00000485450 TMEM33P57088 247 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 RGS8P57771 180 aaPredicted RBP6.77□□□□□ -1.32
USP4-211ENST00000485450 RHEBQ15382 184 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 OR7A5Q15622 319 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 NIPAL3Q6P499 406 aa6.77□□□□□ -1.32
USP4-211ENST00000485450 MEPCEQ7L2J0 689 aaKnown RBP6.77□□□□□ -1.32
USP4-211ENST00000485450 VASH2Q86V25 355 aa6.77□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms