RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 PRKACBP22694 351 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 ALDH3B1P43353 468 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 PER3P56645 1201 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 ACTBP60709 375 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 BTG1P62324 171 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 ACTG1P63261 375 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 SSBP1Q04837 148 aaKnown RBP14.47□□□□□ -0.09
CTSA-207ENST00000484855 SF3B4Q15427 424 aaKnown RBP eCLIP14.47□□□□□ -0.099e-10■■■□□ 16.4
CTSA-207ENST00000484855 SLC22A6Q4U2R8 563 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 CMBLQ96DG6 245 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 MS4A3Q96HJ5 214 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 NICN1Q9BSH3 213 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 CST11Q9H112 138 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 BANF2Q9H503 90 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 MCUBQ9NWR8 336 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 DKK4Q9UBT3 224 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 KCNN3Q9UGI6 736 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 INTS1Q8N201 2190 aaKnown RBP14.47□□□□□ -0.09
CTSA-207ENST00000484855 A0A1W2PP11 408 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 FAM230AA0A1W2PPH8 454 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 TMEM235A6NFC5 223 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 CCNKO75909 580 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 NAT2P11245 290 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 FAUP35544 74 aaKnown RBP14.47□□□□□ -0.09
CTSA-207ENST00000484855 MTCP1P56278 107 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 UBE2NP61088 152 aaKnown RBP14.47□□□□□ -0.09
CTSA-207ENST00000484855 ZNF260Q3ZCT1 412 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 SFRP4Q6FHJ7 346 aaPredicted RBP14.47□□□□□ -0.09
CTSA-207ENST00000484855 FAAP20Q6NZ36 180 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 FAM180AQ6UWF9 173 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 Q6ZTK2 550 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 DEDD2Q8WXF8 326 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 AQP3Q92482 292 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 SEH1LQ96EE3 360 aa14.47□□□□□ -0.09
CTSA-207ENST00000484855 NUDT16L1Q9BRJ7 211 aaKnown RBP14.47□□□□□ -0.09
CTSA-207ENST00000484855 DMXL2Q8TDJ6 3036 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 SERPINA5P05154 406 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 TPOP07202 933 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 FOXF2Q12947 444 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 GK2Q14410 553 aaPredicted RBP14.46□□□□□ -0.09
CTSA-207ENST00000484855 FAM189A2Q15884 450 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 TBR1Q16650 682 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 ZBTB37Q5TC79 503 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 LHFPL2Q6ZUX7 228 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 MRPL21Q7Z2W9 205 aaKnown RBP14.46□□□□□ -0.09
CTSA-207ENST00000484855 C1QL2Q7Z5L3 287 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 OR10R2Q8NGX6 335 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 BORCS8Q96FH0 119 aa14.46□□□□□ -0.09
CTSA-207ENST00000484855 REPIN1Q9BWE0 567 aaKnown RBP14.46□□□□□ -0.09
CTSA-207ENST00000484855 ELF5Q9UKW6 265 aaPredicted RBP14.46□□□□□ -0.09
CTSA-207ENST00000484855 MBD3L4A6NDZ8 208 aaPredicted RBP14.46□□□□□ -0.1
CTSA-207ENST00000484855 MBD3L3A6NE82 208 aaPredicted RBP14.46□□□□□ -0.1
CTSA-207ENST00000484855 WIPF3A6NGB9 483 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 HMX3A6NHT5 357 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 MBD3L5A6NJ08 208 aaPredicted RBP14.46□□□□□ -0.1
CTSA-207ENST00000484855 DHFRP00374 187 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 CHRM2P08172 466 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 TRAPPC2P0DI81 140 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 TRAPPC2BP0DI82 140 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 GTF2F2P13984 249 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 HLA-DMAP28067 261 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 PLCXD3Q63HM9 321 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 BTN2A1Q7KYR7 527 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 CCDC36Q8IYA8 594 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 SLC30A7Q8NEW0 376 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 MBD3L2Q8NHZ7 208 aaPredicted RBP14.46□□□□□ -0.1
CTSA-207ENST00000484855 PIGCQ92535 297 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 EXTL1Q92935 676 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 URM1Q9BTM9 101 aaKnown RBP14.46□□□□□ -0.1
CTSA-207ENST00000484855 ELL3Q9HB65 397 aaPredicted RBP14.46□□□□□ -0.1
CTSA-207ENST00000484855 PTTG3PQ9NZH4 202 aa14.46□□□□□ -0.1
CTSA-207ENST00000484855 BSNQ9UPA5 3926 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 A0A0A6YYD4 124 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 SERPINA2P20848 420 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 RBP2P50120 134 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 ZP1P60852 638 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 GABRA6Q16445 453 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 CDNFQ49AH0 187 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 MOB3CQ70IA8 216 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 OR56B2PQ8NGI1 322 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 OR4C16Q8NGL9 310 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 ZNF75AQ96N20 296 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 TECTBQ96PL2 329 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 C20orf85Q9H1P6 137 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 SLC7A11Q9UPY5 501 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 STARD10Q9Y365 291 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 CEP295Q9C0D2 2601 aa14.45□□□□□ -0.1
CTSA-207ENST00000484855 A0A1W2PR80 420 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 WDR1O75083 606 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 NGFP01138 241 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 FCER2P06734 321 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 H2AFB2P0C5Z0 115 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 GNB3P16520 340 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 COX5AP20674 150 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 EIF2B2P49770 351 aaKnown RBP14.44□□□□□ -0.1
CTSA-207ENST00000484855 SEM1Q6ZVN7 128 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 CDH24Q86UP0 819 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 CD163Q86VB7 1156 aa14.44□□□□□ -0.1
CTSA-207ENST00000484855 DRAXINQ8NBI3 349 aaPredicted RBP14.44□□□□□ -0.1
CTSA-207ENST00000484855 OR10K1Q8NGX5 313 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms