RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 OR3A2P47893 321 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 CLDN17P56750 224 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 CCL7P80098 99 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 DEFA5Q01523 94 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 KISS1Q15726 138 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 SGCAQ16586 387 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 GFOD2Q3B7J2 385 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 C10orf128Q5T292 105 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 RTL6Q6ICC9 239 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 PPP1R3BQ86XI6 285 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 GTPBP8Q8N3Z3 284 aaPredicted RBP17.33■□□□□ 0.36
LIMS2-215ENST00000484252 LINC00469Q8N7U9 141 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 GJC3Q8NFK1 279 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 PCDHB10Q9UN67 800 aa17.33■□□□□ 0.36
LIMS2-215ENST00000484252 CHCHD2Q9Y6H1 151 aaPredicted RBP17.33■□□□□ 0.36
LIMS2-215ENST00000484252 A0A1W2PP11 408 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 A0A1W2PQM1 296 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 CA11O75493 328 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 CSNK1A1P48729 337 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 AKR1D1P51857 326 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 PPA1Q15181 289 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 UNQ6126/PRO20091Q6UXV3 157 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 BAP18Q8IXM2 172 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 RHBDD1Q8TEB9 315 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 PP6455Q8WZ26 134 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 UBE2ZQ9H832 354 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-215ENST00000484252 ZNF160Q9HCG1 818 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 TMEM100Q9NV29 134 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 OSGIN2Q9Y236 505 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 V9GYS6 101 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 FOXI3A8MTJ6 420 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-215ENST00000484252 EPHA8P29322 1005 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-215ENST00000484252 ZNF133P52736 654 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-215ENST00000484252 SURF2Q15527 256 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-215ENST00000484252 PLEKHN1Q494U1 663 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-215ENST00000484252 MRPL14Q6P1L8 145 aaKnown RBP17.32■□□□□ 0.36
LIMS2-215ENST00000484252 PRSS54Q6PEW0 395 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 FOXL2NBQ6ZUU3 175 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 OR1S2Q8NGQ3 325 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 TMEM54Q969K7 222 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 C10orf35Q96D05 121 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 CCDC74BQ96LY2 380 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 RTBDNQ9BSG5 229 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-215ENST00000484252 NELFAQ9H3P2 528 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 WNT16Q9UBV4 365 aa17.32■□□□□ 0.36
LIMS2-215ENST00000484252 USP34Q70CQ2 3546 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 FAM74A7A6NL05 159 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 SERPINE3A8MV23 424 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 H3F3AP84243 136 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 SLC9A3R2Q15599 337 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 FAM74A3Q4VXF1 159 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 Q6ZSR3 168 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 OR13G1Q8NGZ3 307 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 RNF141Q8WVD5 230 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 LYZL4Q96KX0 146 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 TM2D1Q9BX74 207 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 BIN3Q9NQY0 253 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 ASF1BQ9NVP2 202 aa17.31■□□□□ 0.36
LIMS2-215ENST00000484252 FIGNL2A6NMB9 653 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 DHRS3O75911 302 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 PET100P0DJ07 73 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 ANOS1P23352 680 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 RPL35P42766 123 aaKnown RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 DHPSP49366 369 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 SNU13P55769 128 aaKnown RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 CSNK2A1P68400 391 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 AIMP2Q13155 320 aaKnown RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 LCN10Q6JVE6 187 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 RAB11FIP2Q7L804 512 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 SLC16A14Q7RTX9 510 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 CSNK2A3Q8NEV1 391 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 NARS2Q96I59 477 aaKnown RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 WDR54Q9H977 334 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 COA4Q9NYJ1 87 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 NXT1Q9UKK6 140 aaKnown RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 LAMA1P25391 3075 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 EIF1BO60739 113 aaKnown RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 VAMP5O95183 116 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 SUPT4H1P63272 117 aaKnown RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 AADACL3Q5VUY0 350 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 ZSCAN4Q8NAM6 433 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 EMG1Q92979 244 aaKnown RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 C2orf50Q96LR7 162 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 NECAB3Q96P71 396 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-215ENST00000484252 ST6GALNAC5Q9BVH7 336 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 CYTL1Q9NRR1 136 aa17.3■□□□□ 0.36
LIMS2-215ENST00000484252 RALGAPA1Q6GYQ0 2036 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 LOC102723996A0A087X1L8 192 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 LY6G6EA0A0G2JKS1 128 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 H0YIZ8 118 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 CD79AP11912 226 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 KLK2P20151 261 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 BLVRBP30043 206 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-215ENST00000484252 ECI1P42126 302 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 HIST1H3AP68431 136 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 ENDOGQ14249 297 aaKnown RBP17.29■□□□□ 0.36
LIMS2-215ENST00000484252 HIST2H3PS2Q5TEC6 136 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 PRAMEF20Q5VT98 475 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 OPN5Q6U736 354 aa17.29■□□□□ 0.36
LIMS2-215ENST00000484252 HIST2H3AQ71DI3 136 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms