RNA–Protein interactions for RNA: ENST00000480301.1

ACTB-211, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 657 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-211ENST00000480301 C8orf4Q9NR00 106 aa17.53■□□□□ 0.4
ACTB-211ENST00000480301 POLR3KQ9Y2Y1 108 aaPredicted RBP17.53■□□□□ 0.4
ACTB-211ENST00000480301 ARHGAP32A7KAX9 2087 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 P2RY10O00398 339 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 CASQ2O14958 399 aaPredicted RBP17.52■□□□□ 0.4
ACTB-211ENST00000480301 FOXH1O75593 365 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 DHRS3O75911 302 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 DBTP11182 482 aaKnown RBP17.52■□□□□ 0.4
ACTB-211ENST00000480301 SRD5A1P18405 259 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 CPT2P23786 658 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 CD80P33681 288 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 CDONQ4KMG0 1287 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 FAM76BQ5HYJ3 339 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 ZBTB37Q5TC79 503 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 OGFRL1Q5TC84 451 aaPredicted RBP17.52■□□□□ 0.4
ACTB-211ENST00000480301 SFRP4Q6FHJ7 346 aaPredicted RBP17.52■□□□□ 0.4
ACTB-211ENST00000480301 FAHD2BQ6P2I3 314 aaPredicted RBP17.52■□□□□ 0.4
ACTB-211ENST00000480301 Q6ZSR3 168 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 ZDHHC23Q8IYP9 409 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 BOLLQ8N9W6 283 aaKnown RBP17.52■□□□□ 0.4
ACTB-211ENST00000480301 FAHD2AQ96GK7 314 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 RTL8AQ9BWD3 113 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 RNPEPL1Q9HAU8 725 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 MIOXQ9UGB7 285 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 GNG8Q9UK08 70 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 PIGLQ9Y2B2 252 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 PCDHGB1Q9Y5G3 927 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 V9GYS6 101 aa17.52■□□□□ 0.4
ACTB-211ENST00000480301 hCG_1807616A0A1W2PRN6 198 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 DAPL1A0PJW8 107 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 A8MXK9 166 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 LGALS8O00214 317 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 CDIPTO14735 213 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 TNFRSF13BO14836 293 aaPredicted RBP17.51■□□□□ 0.39
ACTB-211ENST00000480301 CLIC3O95833 236 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 RPS2P15880 293 aaKnown RBP17.51■□□□□ 0.39
ACTB-211ENST00000480301 FAHP16930 419 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 EGR1P18146 543 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 CCL1P22362 96 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 ELF3P78545 371 aaPredicted RBP17.51■□□□□ 0.39
ACTB-211ENST00000480301 LYPD2Q6UXB3 125 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 WDR82Q6UXN9 313 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 THAP5Q7Z6K1 395 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 ACBD7Q8N6N7 88 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 OR14K1Q8NGZ2 314 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 RNF170Q96K19 258 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 TMPRSS13Q9BYE2 586 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 ACOXLQ9NUZ1 547 aa17.51■□□□□ 0.39
ACTB-211ENST00000480301 WNK2Q9Y3S1 2297 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 PPIAL4CA0A0B4J2A2 164 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 A0A0G2JMP0 313 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 A0A0X1KG70 313 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 TMEM210A6NLX4 147 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 C3orf80F5H4A9 247 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 TRAPPC2LH3BP13 241 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 WBP4O75554 376 aaKnown RBP17.5■□□□□ 0.39
ACTB-211ENST00000480301 MTRF1O75570 445 aaKnown RBP17.5■□□□□ 0.39
ACTB-211ENST00000480301 AVPP01185 164 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 CFHR2P36980 270 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 PSMB10P40306 273 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 OR12D2P58182 307 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 ADARB1P78563 741 aaKnown RBP17.5■□□□□ 0.39
ACTB-211ENST00000480301 ODF4Q2M2E3 257 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 WDR38Q5JTN6 314 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 ZNF691Q5VV52 312 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 DCDC5Q6ZRR9 648 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 C1orf229Q6ZS94 237 aaPredicted RBP17.5■□□□□ 0.39
ACTB-211ENST00000480301 KCTD20Q7Z5Y7 419 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 PRSS35Q8N3Z0 413 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 OR4M2Q8NGB6 313 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 LRRC29Q8WV35 223 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 RPL3LQ92901 407 aaKnown RBP17.5■□□□□ 0.39
ACTB-211ENST00000480301 NEIL1Q96FI4 390 aaPredicted RBP17.5■□□□□ 0.39
ACTB-211ENST00000480301 HIST1H2AAQ96QV6 131 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 MMP26Q9NRE1 261 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 MRPS18AQ9NVS2 196 aaKnown RBP17.5■□□□□ 0.39
ACTB-211ENST00000480301 ENPP5Q9UJA9 477 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 MYRFQ9Y2G1 1151 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 LRCH1Q9Y2L9 728 aa17.5■□□□□ 0.39
ACTB-211ENST00000480301 OOEPA6NGQ2 149 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 PHF1O43189 567 aaPredicted RBP17.49■□□□□ 0.39
ACTB-211ENST00000480301 KIR3DL2P43630 455 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 RAB40BQ12829 278 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 CEACAM21Q3KPI0 293 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 ESCO2Q56NI9 601 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 DMRTC1Q5HYR2 192 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 CEP78Q5JTW2 689 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 DCAF12L2Q5VW00 463 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 TEX36Q5VZQ5 186 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 TTC23Q5W5X9 447 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 TMEM42Q69YG0 159 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 MOB3CQ70IA8 216 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 DOK3Q7L591 496 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 FAM220AQ7Z4H9 259 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 CYGBQ8WWM9 190 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 ZNF649Q9BS31 505 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 DCLRE1BQ9H816 532 aa17.49■□□□□ 0.39
ACTB-211ENST00000480301 RPL36Q9Y3U8 105 aaKnown RBP17.49■□□□□ 0.39
ACTB-211ENST00000480301 TRAV38-1A0A0B4J264 116 aa17.48■□□□□ 0.39
ACTB-211ENST00000480301 ERICH4A6NGS2 130 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms