RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 IGHV2-70P01814 119 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ISG15P05161 165 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 LIPFP07098 398 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 SBK2P0C263 348 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 CCL2P13500 99 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF12P17014 697 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 CCL1P22362 96 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 CCNOP22674 350 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 MDH2P40926 338 aaKnown RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 MAGEB1P43366 347 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 NPY4RP50391 375 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 CCR9P51686 369 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ISL1P61371 349 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ERVS71-1P61550 626 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 TNFAIP6P98066 277 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 DGCR2P98153 550 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 IL5RAQ01344 420 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 GABPB1Q06547 395 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 IL18R1Q13478 541 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ZSCAN26Q16670 478 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM255AQ5JRV8 349 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF684Q5T5D7 378 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ATPAF1Q5TC12 328 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM42Q69YG0 159 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 PLBD1Q6P4A8 553 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 Q6ZR03 302 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 Q6ZRM9 215 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 MEX3DQ86XN8 651 aaKnown RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 FAM90A1Q86YD7 464 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 CPOQ8IVL8 374 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 HS3ST5Q8IZT8 346 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 PQLC1Q8N2U9 271 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 GALNT4Q8N4A0 578 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 OR6K6Q8NGW6 343 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 OR10Z1Q8NGY1 313 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 RHOXF1Q8NHV9 184 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ZNRF4Q8WWF5 429 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 YIPF5Q969M3 257 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 MRPL48Q96GC5 212 aaKnown RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 Q96MT0 163 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 OR8B4Q96RC9 309 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 IL4I1Q96RQ9 567 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 CNN2Q99439 309 aaKnown RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 COPS4Q9BT78 406 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 RHOFQ9HBH0 211 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 S100A14Q9HCY8 104 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF275Q9NSD4 429 aaPredicted RBP4.12□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM106BQ9NUM4 274 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ING3Q9NXR8 418 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 KCNS2Q9ULS6 477 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 GTF2A1LQ9UNN4 478 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 LRCH1Q9Y2L9 728 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 GRIP1Q9Y3R0 1128 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 ORC6Q9Y5N6 252 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 NPTNQ9Y639 398 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 DNHD1Q96M86 4753 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 SVEP1Q4LDE5 3571 aa4.12□□□□□ -1.75
PTCD3-213ENST00000480102 FN1P02751 2386 aaKnown RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 hCG_38984A0A1B0GV85 526 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 CCDC182A6NF36 153 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 TMEM178BH3BS89 294 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 DLGAP1O14490 977 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 TNFRSF13BO14836 293 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 CASQ2O14958 399 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 PRKYO43930 277 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 LMX1BO60663 402 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 MTRF1O75570 445 aaKnown RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 FOXH1O75593 365 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 ECDO95905 644 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 IGHV2-5P01817 119 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 SLPIP03973 132 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 LCATP04180 440 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 MSMBP08118 114 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 SPARCP09486 303 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 MUC1P15941 1255 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 GABRB1P18505 474 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 ADRA2CP18825 462 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 HNF1AP20823 631 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 PRKACGP22612 351 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 PYCR1P32322 319 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 BTG1P62324 171 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 CCL8P80075 99 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 FAM3AP98173 230 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 RAB40BQ12829 278 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 PPP1R8Q12972 351 aaKnown RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 KPNB1Q14974 876 aaKnown RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 MAD2L1BPQ15013 274 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 MEP1BQ16820 701 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 ZNF829Q3KNS6 432 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 CHRFAM7AQ494W8 412 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 TEX36Q5VZQ5 186 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 IGFL4Q6B9Z1 124 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 CORO6Q6QEF8 472 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 PLEKHG7Q6ZR37 379 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 DCDC5Q6ZRR9 648 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 C9orf139Q6ZV77 190 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 MRPL21Q7Z2W9 205 aaKnown RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 GLCCI1Q86VQ1 547 aa4.11□□□□□ -1.75
PTCD3-213ENST00000480102 ERI1Q8IV48 349 aaKnown RBP4.11□□□□□ -1.75
PTCD3-213ENST00000480102 LINC00346Q8IVM7 164 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms